Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_8168 |
Symbol | |
ID | 7365075 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011982 |
Strand | - |
Start bp | 115983 |
End bp | 117338 |
Gene Length | 1356 bp |
Protein Length | 451 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 643641777 |
Product | hypothetical protein |
Protein accession | YP_002540074 |
Protein GI | 222080211 |
COG category | [R] General function prediction only |
COG ID | [COG2079] Uncharacterized protein involved in propionate catabolism |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCATGCAA TCGAACAACT CGCCACCTTC GCCGCTACCC ATCCTGCCGG TAGCCTGCCG CAAGCGACCA AGGATATTTG CGCGATCCTG ATCGCGGATC TTCTTGCCGC GACCGCCGCA GGCCTGCACT CGAACCTTGC GCTCGCGGCC CGCCGTGCTG CCATCGCGAG CTACGGGAAG GGACCGTCCA CAGTCTGGAT GACTGATCAA TCCCTGTCGA TCGCTGGCGC GGCGATGGCG AACGCGGCGG CCGCGAGCGC GCTCGACATC GATGACGGCC ATCGGGGCGC CGCTGGCCAT CCAGGTGCAG GCATCATCCC GGCAGCCATC GCGGTCGGTC AAGCGATTGG GACCTCCGAC GAGGACATTT TTGAAGCGAT TGCGATCGGC TACGATGTTG CCCTGCGTGT CGCGACCGCC CGCCCGACGG AAACGATCGA CAGCTATGCG AGTGGCCGCT GGGTCAACTT CGGCGTCGCT GCAGCAGTTG GTAGGCTTTT GAAGCTCTCG CCGTCCCAGA TGGCGAACGC AATCGGGATC GCAGGCGCTG AAGGCCCGAT CGGATACAAG AAGGGCACCT CGCGTTATCA GGGAAGCACC GTAAAGGAAC TCATTCCGCC AGCGGTTGTC GCTGGATTGA CTGCGGCATT CCGAGCCCAG GCTGGTGCTA CCGGTCCGCT CGATCTACTC GACAACGAGA CGCTCTATAC CCGTTCCGTT TTGACAGGTG AACTTGGCGA ACATTGGTGG ATTGGCGACT GCTACCTCAA GCCATACGCC TGCTGCCGTT ACATGCATGG CGCTGTCGAC GCGATCCTCG AGTTGCGCCG GCCAGATGCA CCGATCAAAA GTCTTCGGAT CGAGACCTTT CAGCGAGGAA CCGAGCTGTC GAACGAGCGC GCACCACGCT CGCTCGAGGG AGCGCAATAC AGCTATTATT TCAGCTGCGC GCTGGCGGCT TTGCGGGGAC GTCAGGCACT TCAGCCAATG GACCCCGCGA GCCTGCGGGA CCCAGAAATC CTCGAACTTT CATCTCGCAT CGAGATGGTC GCACACTCTG ATTTCAATGA CAGCTTTCCA AAAGGAACGC CGTCCCGAGT CATCATTGAC CAGGGCAATG GGCCGGAGAG CCGCACGGTT CTCTTCCCTC TTGGCGATGT CGCAAATCCG ATGAGCGCCG AACAGGTCAT GGAGAAGTTT CGCCTGATCG GTGCGGAAAG CCTCACCGAA GACGGGAGGA ACACCATTCT CGTCGCTATC TCAAAACTGA CGACGGATGG TTTCACCCCA TTGCTTTCCG CCCTTGCGGA CCGCGCCGGC CAGATCTCAA GCCCAAGAGC AGATGAGGTC GCCTAA
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Protein sequence | MHAIEQLATF AATHPAGSLP QATKDICAIL IADLLAATAA GLHSNLALAA RRAAIASYGK GPSTVWMTDQ SLSIAGAAMA NAAAASALDI DDGHRGAAGH PGAGIIPAAI AVGQAIGTSD EDIFEAIAIG YDVALRVATA RPTETIDSYA SGRWVNFGVA AAVGRLLKLS PSQMANAIGI AGAEGPIGYK KGTSRYQGST VKELIPPAVV AGLTAAFRAQ AGATGPLDLL DNETLYTRSV LTGELGEHWW IGDCYLKPYA CCRYMHGAVD AILELRRPDA PIKSLRIETF QRGTELSNER APRSLEGAQY SYYFSCALAA LRGRQALQPM DPASLRDPEI LELSSRIEMV AHSDFNDSFP KGTPSRVIID QGNGPESRTV LFPLGDVANP MSAEQVMEKF RLIGAESLTE DGRNTILVAI SKLTTDGFTP LLSALADRAG QISSPRADEV A
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