| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_8105 |
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| Symbol | |
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| ID | 7365201 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011982 |
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| Strand | - |
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| Start bp | 74734 |
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| End bp | 75630 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643641739 |
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| Product | IS1111A/IS1328/IS1533 family transposase |
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| Protein accession | YP_002540036 |
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| Protein GI | 222080173 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3547] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.162674 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCAGGC TGACAATCGG AATCGACCTC GCAAAGAATG TCTTCCAGGT TCACGGCATT
GATGACAGCA ATCGTGTCGT GATCGCTCAG AAACTCCGGC GCGCGCACCT TCTTGCATTC
TTTGCCAAGC TGGAGCCGAG TCTGATCGGC ATGGAGGCGT GCGGCTCCGC GCATCACTGG
GCGCGCGAAC TGACAGGCAT GGGCCATGAG GTCAAGCTGA TGGCGCCGGC TTATGTGAAG
CCGTACGTGA AGCGGGGGAA GAACGACATG GTGGATGCCG AGGCGATCTG CGAGGCTGTG
ACCCGGCCGA CCATGCGGTT CGTTCCAATC AAAACCGTGT CGCAGCAGTC GATCCTGATG
GTGCACAAGT CGCGTGCTCT CCTCATCCGG CAGAGGACCA TGCTGGTGAA CGCCTTACGA
GGCCATCTCA CGGAGATCGG CATGGTGGCG CCGGTCGGGA TCGAAAGAAC GGCAGAGCTC
GTCGAGCGGG TGCTCGCACA CAAGCCGACC GAGCTGGACG TTCCGCCACT CGTGACTGAC
ATTGTCGTAT CCTTGGCCAG GCAAATCGAC TCCCTGACCG CCGAGGTTAG GACACTTGAA
GCCAAGATAC GCGAATGGCA ACGAACGAGC GAAGCAGGCC GCAGGCTTGC GACGATCCCC
GGCGTCGGCG TAATCACTGC CACAGCATTG GCGGCGACGG TGCCTGATGC GTCAGTCTTC
AGGTCGGGGC GAGAATTTGC CGCATGGCTC GGGCTGACGC CACGATCGAA CTCGTCCGGA
GGAAAAGAGC GCCTCGGCAG GATCACGAAG GCCGGGAACC GATATCTGCG AACGCTGCTG
ATCGTCGGCG CGACAGCCGT CCTCAGGCAT GTCAGGCATA ATACCAGCCT GCGTTGA
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| Protein sequence | MSRLTIGIDL AKNVFQVHGI DDSNRVVIAQ KLRRAHLLAF FAKLEPSLIG MEACGSAHHW
ARELTGMGHE VKLMAPAYVK PYVKRGKNDM VDAEAICEAV TRPTMRFVPI KTVSQQSILM
VHKSRALLIR QRTMLVNALR GHLTEIGMVA PVGIERTAEL VERVLAHKPT ELDVPPLVTD
IVVSLARQID SLTAEVRTLE AKIREWQRTS EAGRRLATIP GVGVITATAL AATVPDASVF
RSGREFAAWL GLTPRSNSSG GKERLGRITK AGNRYLRTLL IVGATAVLRH VRHNTSLR
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