| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_8020 |
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| Symbol | |
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| ID | 7365150 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011982 |
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| Strand | + |
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| Start bp | 21013 |
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| End bp | 22674 |
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| Gene Length | 1662 bp |
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| Protein Length | 553 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643641702 |
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| Product | trehalose synthase |
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| Protein accession | YP_002539999 |
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| Protein GI | 222080136 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | [TIGR02456] trehalose synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGATCAACG ACCTCTGGTA CAAGAACGCT GTCGTCTACT GCCTGTCCGT CGAGACCTTC
ATGGATGCCA ACGGCGATGG AGTGGGCGAT TTTCAGGGGC TGCAACGGCG GTTGGATTAT
CTGGCCGGTC TGGGCGTCAA TGCCATCTGG CTGATGCCGT TTCAGGCCTC TCCGGGTCTC
GATGATGGCT ACGATGTCTC CGACTATTAC AACATCGATC CCAGATACGG CACCCTCGGC
GACTTCGTCG AATTCACCCA TAGCGCAAAG CAACGCGGTA TACGGGTGCT GATCGACCTC
GTCGTCAATC ATACGTCCGA TCAGCATCCC TGGTTCAAAC AGGCCTGCGC CGACAAGAAT
TCCCGATACA GGGACTGGTA CGTATGGTCT GAGAAGAAGC CGGAAAATGC CGACGAGGGC
ATGGTCTTTC CTGGTGTACA AAAGACCACA TGGACACGGG ACGAAAAGTC CGGCGAATAC
TATTTTCACC GTTTCTTCAA ATTCCAGCCG GATCTCAACA CCAGCAATCC ACATGTCCAG
GCGGAAATCC TCAAGATCAT GGGTTTCTGG ATACAGCTCG GCGTATCGGG TTTTCGCATG
GACGCCGTTC CCTTCGTGAT CGCCGAAAAG GGTGCAGATG TGAAGGAATC GAAGCCGCAG
TTCGATCTGT TGCGCAGTTT CCGCGAGTTC CTGCAGTGGC GCAAGGGTGA CAGCATCATC
CTTGCGGAGG CCAATGTCGT GCCCAAGGAG AACCTGCAGT ATTTCGGCGA CGACGGCGAT
CGTATGCAGA TGATGTTCAA TTTCCACGTC AACCAGGCTC TGTTCTACGC GCTCGCTAGC
GCCGATACCC GGCCCCTTGA CAAGGCGATG AACGAAACCC GGGAGCGACC GCAAACGGGG
CAATGGGGAA TATTCCTGCG CAACCACGAC GAACTCGATC TTGGCCGGCT GACGGAAAAA
CAGCGGCAAG CCGTGTTTTC CGCCTTCGGT CCAGACAAGG ACATGCAGCT CTATGATCGG
GGGATACGGC GTCGCCTAGC GCCGATGCTG GGCGGCGATA CCAGGCGTCT CAGGCTTGCT
TATAGCCTGA TGTATTCGCT GCCGGGCACC CCGGTCCTGC GATATGGTGA CGAGATCGGC
ATGGGAGACG ACCTAGCATT GGAGGAGCGC AACTGCGCCC GCACGCCTAT GCAATGGTCG
ACCGAGCCGC ATGGCGGCTT CACCAAGGCG GAAAAACCCG TCTTGCCCGT CATCGAAGGA
GGTCCCTATG GGTTCGAACA TGTCAATGTC GCGGCACAGC GGCGGGACGC GGAATCGATG
CTGAACTGGA CCGAGCGGAT GATCCGTATG CGAAAGGAAG CCCCTGAAAT CGGATGGGGA
AGTTTCAGCG TTCTGGACTG CGGCGATACC GGTGTCCTGG CGATGCGCTA CGACTGGCGC
CACAACGCCG TCGTCATCAT CCACAATCTC CACGACAAGC CAGTCGATAT CTCGTTCGAT
CCCGGCGTAG GTGAGAGTGG ACGCGTCCTG ATCGACATCG CCGACGGCAG CGACAGCAGC
GCGGACGAGA AAGGCCGGCA TAACATGGTG ATCGAGCCAT TCGGTTATCG CTGGTACCGC
GCCGGCGGGC TCGATTACCT GCTCAAGAGA AGCGACATCT GA
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| Protein sequence | MINDLWYKNA VVYCLSVETF MDANGDGVGD FQGLQRRLDY LAGLGVNAIW LMPFQASPGL
DDGYDVSDYY NIDPRYGTLG DFVEFTHSAK QRGIRVLIDL VVNHTSDQHP WFKQACADKN
SRYRDWYVWS EKKPENADEG MVFPGVQKTT WTRDEKSGEY YFHRFFKFQP DLNTSNPHVQ
AEILKIMGFW IQLGVSGFRM DAVPFVIAEK GADVKESKPQ FDLLRSFREF LQWRKGDSII
LAEANVVPKE NLQYFGDDGD RMQMMFNFHV NQALFYALAS ADTRPLDKAM NETRERPQTG
QWGIFLRNHD ELDLGRLTEK QRQAVFSAFG PDKDMQLYDR GIRRRLAPML GGDTRRLRLA
YSLMYSLPGT PVLRYGDEIG MGDDLALEER NCARTPMQWS TEPHGGFTKA EKPVLPVIEG
GPYGFEHVNV AAQRRDAESM LNWTERMIRM RKEAPEIGWG SFSVLDCGDT GVLAMRYDWR
HNAVVIIHNL HDKPVDISFD PGVGESGRVL IDIADGSDSS ADEKGRHNMV IEPFGYRWYR
AGGLDYLLKR SDI
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