Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_7635 |
Symbol | |
ID | 7380283 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011981 |
Strand | + |
Start bp | 572212 |
End bp | 573078 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 643641635 |
Product | AraC-type DNA-binding domain-containing protein |
Protein accession | YP_002539932 |
Protein GI | 222102893 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CTGTGCAACG TCTATGTCGC GCTCGATCCA GAAACACCGT CCAAAATGGA CTTCCGAGGT GCTGTAACCG ATCACCCGTT CGACGAAATC GGCATTTCGA ATATCGCGTC GCTGAAACAG ACCATTGCAC GCACGACAAG CGGCATACGC CGCGACACGA ATGCCTATTG TTTCCTCAAT CTGCAAGTGG CCGGCACATG CCGCATCCGT CAGGGAAACC GCGATGCCAT CACGATGCCC GGGGAGTTCA CCGTCGTCGA TTCGTCCGAA CCGTTTCTTC TCGACTATAC GAGCGACACT TGGGAACAAT ATGCGTTCAA GATCCCGAAG CATATGTTTG ATTCCCATGT CGGCCACGAA TTCGTGGCGC GCACAGTCAC GGACCGCACA CCCATCGGCA AGGTCGTTGT CGATTTTCTG GCATCCATCG CCCGAAACCC CGAGAATCTG CGCCACAGCT CGATCAATAT GACGAAGACA ATCATCGACC TTGTTGCCAT GTCGCTTCGA GCCTCGACGC CCGAGCGTGA CGACGATCGC CGCCGGACCT TCAGGTCACC CCTTCGTCAG TCTGTTCTAC GCTATGTCGA GCTTAACTTC GCAGACCCGG AGATCTCACC CGCCAAGGTC GCGGCTCATT TCGGAATATC GACCCGCTAC CTGCACAAGC TGCTGGAAGA ACACGGCGAG ACCTTGGGGC AGATCATCCT GGCAAAGCGC CTCGATCGTT GCGCCTCCGA ACTGCGTAAA GGGACATGCC TGACCATTTC GGAAGCAGCC TTCCGCTGGG GTTTCAACGA CATGTCCTAT TTCAGCAGAG CCTTCCGGCG ACGTTTCGGC GTTGCCCCCC GCGATTACAG GCGATGA
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Protein sequence | MCNVYVALDP ETPSKMDFRG AVTDHPFDEI GISNIASLKQ TIARTTSGIR RDTNAYCFLN LQVAGTCRIR QGNRDAITMP GEFTVVDSSE PFLLDYTSDT WEQYAFKIPK HMFDSHVGHE FVARTVTDRT PIGKVVVDFL ASIARNPENL RHSSINMTKT IIDLVAMSLR ASTPERDDDR RRTFRSPLRQ SVLRYVELNF ADPEISPAKV AAHFGISTRY LHKLLEEHGE TLGQIILAKR LDRCASELRK GTCLTISEAA FRWGFNDMSY FSRAFRRRFG VAPRDYRR
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