| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7606 |
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| Symbol | |
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| ID | 7380260 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011981 |
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| Strand | + |
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| Start bp | 548168 |
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| End bp | 549157 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643641612 |
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| Product | ABC transporter substrate binding protein (amino acid) |
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| Protein accession | YP_002539909 |
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| Protein GI | 222102870 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CTGATTGCTT CGAGGTTTGC GTCAATTCAC GCCGATAAAA AGTTAAATGG GGATCATATG
CGCAGCGTCA CGAAAAGCCT CAAAGACAGC CTGGCCGGCA TCGCATTCGC TTTGCTCGCG
ACCTCGACAC TTGCCGCAGA AGGGACCGCC ATTAAGATGG TGCCCGACGC GGAAGTCACG
AAACTGCCTG GTATCGCGTT CGACCAGAGC CTGGCAGACC GCCTGCCGTC TGCCATCAGG
GACAAGAAAG CCATCAAGGT GGCAACCGAC CTGACGCCCC CGATCAGCTT TCAGGCCGAG
GATGGAAAAC TCATCGGGAT CGATGCTGAT ATTGCCGCAG CCCTCGGCGT TATTCTCGGG
ATCGATGTTC AGATGACCAA TGTCGGCGCT GGCGCCGCAA TCGTACCGGC TGTCGTCTCC
AAGCGTTTCG ACATGACAAT TTCCGGCATC AACGACGATG TGGAACTGGA AAAGCAGGTC
GATGTCATCG ACTACATGTT TGATGCCACG ACGATCATGA CCATCAAGGG CAATCCACTC
GGCATCAAGA GCATGGAAGA TCTGTGCGGC AAGAAGGTTG CTGCCCCCGT CGGTACGTTC
CAGGCGCGCC TGGTTGAGGC CGCATCGGCA AAATGCTCGA AACCTATAAA TATCATCTCG
ATTCCGAAAA TGCCTGACGT CCTGCAAGCT GTTCGCACCG GTCGCGCCGA CGCGACCGTT
AACGGCTTCG CGACAAGCGT TTATACGACG AAAAACCAGA CCGGTAAGGG TGTTGGCCTT
CAGGCGCTTC CGGATGTCCG CCTCGCAGTC GGTTATCTCG GCATGCTGAC GTCGAAGGAC
AATCCGGAAC TGCGTGATGT GGTCATCGCC TCGTTGCAAC ACATGGTCGA CAGCGGCGCC
TACAAGGCGA TCATGGAGAA ATGGGGCCTT GGCCCGCTCG CCGTGACGAC TGTCAAGTTC
AATGACGCCG CCAGCATGCC GGTGAACTGA
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| Protein sequence | MIASRFASIH ADKKLNGDHM RSVTKSLKDS LAGIAFALLA TSTLAAEGTA IKMVPDAEVT
KLPGIAFDQS LADRLPSAIR DKKAIKVATD LTPPISFQAE DGKLIGIDAD IAAALGVILG
IDVQMTNVGA GAAIVPAVVS KRFDMTISGI NDDVELEKQV DVIDYMFDAT TIMTIKGNPL
GIKSMEDLCG KKVAAPVGTF QARLVEAASA KCSKPINIIS IPKMPDVLQA VRTGRADATV
NGFATSVYTT KNQTGKGVGL QALPDVRLAV GYLGMLTSKD NPELRDVVIA SLQHMVDSGA
YKAIMEKWGL GPLAVTTVKF NDAASMPVN
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