| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7572 |
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| Symbol | |
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| ID | 7380102 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011981 |
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| Strand | - |
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| Start bp | 517027 |
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| End bp | 519432 |
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| Gene Length | 2406 bp |
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| Protein Length | 801 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643641584 |
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| Product | glucan 1,4-alpha-glucosidase |
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| Protein accession | YP_002539881 |
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| Protein GI | 222102842 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3387] Glucoamylase and related glycosyl hydrolases |
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| TIGRFAM ID | [TIGR01535] glucan 1,4-alpha-glucosidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGACCACCC TCGTCGATTT TGCTCCCGGC AATCCAGGAA TTCAAGCGCG TTGGACGTCG
AGCGCAAAGA GTGGTTTGGG TACTGCGCTT TCCGCCCGGT CTCCCGTCTG GTTCACGTTG
AGCCATGGGG TGCTGAATGA GGTCTATTAT CCCAGAGTGG ACAGCGCCTG TATTCGAGAT
CTTGGGTTGC TCGTTATTGG TCCTGAAGGA TATTTTTCCG AGGAAAAGCG CGATTGCACC
ACAACGACCC ATCAGGTCGA AAGCGGCGTA CTGGCGTTTC ATGTCGTCAA CATGTCACGA
GATGGCCGCT ACCGGATCGA AAAGCAGATC ATTTCCGATC CTGCTCGCGC AACCGTTCTC
CAGCGCATCA CGTTCATGCC TTTGGTCGGT AACATATCCG ATTACAAGGT CTATGCGCTG
CTTGCGCCTC ATCTTGTCAA CGCCGGGATG GATAATTCCG CATGGATCGG TGAGCAGGAT
GATACCACGC TTCTTTTCGC AAGCGGCCGA TCACGCTATC TTGCGCTTGG ATCATCACTT
CCTTGGGCCG AGCGATCTGC TGGCTTTGCC GGGCAGTCCG ATGGCTATAC CCAATTGCTG
CAAAACGGCA GTCTCGATCC CCAATATCAG CGTGCCGACG ATGGCAATAC CGCGCTGACG
GGGCAAATCC CGTTCACGGA AAGTGCCAAC ACCGCAATTC TGGCCCTTAG CTTTGGCCAG
TCGGAAACGG AAGCGGGCGC AAAGGCACTC GCCAGTCTGC GCGATGGGTT CGAGGCCGCA
TTCGGCATGT ATTGCGCGAA CTGGCGCGGC TGGCAAAAGG GCCTCTACGA TCTGGACCGC
GAGACCGCAA AGCCCATCAA TATGTACCGC GTCTCGACTG CCGTGCTTGC AGCCCATCGC
GCTGCTGATC GGCGTGGTGC CGTTGTTGCC AGCCTGTCCA TTCCTTGGGG GGCGAGCAAG
GGGGATGATG ATCTGGGTGG CTATCACCTT GTCTGGCCTC GCGATCTCGT GGAAAGCGCG
GGCGGCTTTC TGGCTGCTGG CGACTGGAAG GAAGCAATCG AAATCCTGGA ATATCTGCGC
GAGGTTCAGT TGGCGTCCGG TCGTTGGCCG CAGAATCTCT GGCTGGATGG CAAGCCCTAT
TGGCTCGGGG TGCAGATGGA TGAATGCGCT TTTCCTATTC TGCTGGCCGA TCTCCTGTAT
CGAAATGGAC ATCTGCCGGA AACGCTGCTG ACCCGATTCC TTCCGATGAT CCGCAAGGCG
GCTGGCTACA TCATCGCAAA TGGGCCTGCC ACCAGCCAGG ACCGCTGGGA AGAAGATGGC
GGTTATAGCC CGTTCACCCT GGCCGTCGAG ATCGCCGCAT TGCTGGCCGG CGCAGACATT
CTGGACCGTG TTGGAGAGCC TGATGTGGCC CAGCATTTGC GCGAAACCGC CGACTGCTGG
AATGAGCAGA TTGAAAACTG GACTTATACC AGCGATTCCA CCCTTTGCGA TGCCGTCGGC
GTGGGAGGCT ATTATGTCCG TATCGGGGGT CTCGATGTCA CTGACGTGGC GACGGGCAGC
CAAGGACAGA CCATTATCCG CAACCGGGCA GCCGATACGT CGATATTGCC GACCCGTGAC
GTTATCAGCC CAGACGCCCT GGCGCTTGTT CGCTTTGGGT TGCGGGCCGC TGATGATCCG
AGGATACTCG ACACGATAAA GGTTATCGAC CATCAATTGA AGATCGATCT GCCGCAAGGT
CCGCTCTGGT ATCGCTACAC GGGTGACGGC TATGGCGAAC ATCCTGATGG CAGCCCGTTC
GATGGCATCG GGCAGGGGCG TCCGTGGCCA TTGCTGGCGG GAGAGCGCGC GCATTACGAG
CTGGCGGCTG GACATCGCGA CGTGGCCGAA CGGCTTCTGG AGACGCTTGA GGCTTCGGCT
GGGACAGAGG GTCTTCTTCC CGAACAGAGC TGGGACGGAG CCGATCTCCC CGAACGCGAG
TTGTTCCTGG GCCGCCCGTC AGGCAGTGCC ATGCCACTCG TCTGGGCGCA TGCGGAATAC
ATCAAGCTGT TGCGTTCGCT GAACGATGGC ACGGTTTTTG ACATGCCGCC GCAGACCGTT
GAGCGCTATG TAAAAGATCA GACGCCATCA ACCCTGCGCA TCTGGCGTTT CAACAATCAG
ATTTCCACCA TACCCCACGG CAAGACATTG CGGCTGGAAC TGGACGCATC GGCCATGGTG
CATTGGAGCG CCACGGGCTG GCACGAGGTG GCGGACACCA GGACACGCGA AACCGGTCTC
GGGACCCATG TTGTCGATAT CGACCTGGCG GACGGCGCGA TCGGCCAGGA ACTGGTGTTC
ACCTTCTTCT GGGAGGAGGC GGATCTCTGG GAAAATGCCA ATTTCAAAGT TCAGATCATA
GCTTAA
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| Protein sequence | MTTLVDFAPG NPGIQARWTS SAKSGLGTAL SARSPVWFTL SHGVLNEVYY PRVDSACIRD
LGLLVIGPEG YFSEEKRDCT TTTHQVESGV LAFHVVNMSR DGRYRIEKQI ISDPARATVL
QRITFMPLVG NISDYKVYAL LAPHLVNAGM DNSAWIGEQD DTTLLFASGR SRYLALGSSL
PWAERSAGFA GQSDGYTQLL QNGSLDPQYQ RADDGNTALT GQIPFTESAN TAILALSFGQ
SETEAGAKAL ASLRDGFEAA FGMYCANWRG WQKGLYDLDR ETAKPINMYR VSTAVLAAHR
AADRRGAVVA SLSIPWGASK GDDDLGGYHL VWPRDLVESA GGFLAAGDWK EAIEILEYLR
EVQLASGRWP QNLWLDGKPY WLGVQMDECA FPILLADLLY RNGHLPETLL TRFLPMIRKA
AGYIIANGPA TSQDRWEEDG GYSPFTLAVE IAALLAGADI LDRVGEPDVA QHLRETADCW
NEQIENWTYT SDSTLCDAVG VGGYYVRIGG LDVTDVATGS QGQTIIRNRA ADTSILPTRD
VISPDALALV RFGLRAADDP RILDTIKVID HQLKIDLPQG PLWYRYTGDG YGEHPDGSPF
DGIGQGRPWP LLAGERAHYE LAAGHRDVAE RLLETLEASA GTEGLLPEQS WDGADLPERE
LFLGRPSGSA MPLVWAHAEY IKLLRSLNDG TVFDMPPQTV ERYVKDQTPS TLRIWRFNNQ
ISTIPHGKTL RLELDASAMV HWSATGWHEV ADTRTRETGL GTHVVDIDLA DGAIGQELVF
TFFWEEADLW ENANFKVQII A
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