Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_7273 |
Symbol | |
ID | 7380499 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011981 |
Strand | + |
Start bp | 229181 |
End bp | 230149 |
Gene Length | 969 bp |
Protein Length | 322 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 643641363 |
Product | DNA topoisomerase |
Protein accession | YP_002539660 |
Protein GI | 222102621 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3569] Topoisomerase IB |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGTGCCA GAGGCTTCCT CTATTACCGG CCAGACGGGC GGCGGATTAC CCAGGCTGAT GAGATTGCTC GCCTGAACTC TCTGGCAATA CCGCCCGCCT ACACAGACGT CGTCATCTCG ACGAATCCCT TCTCACACCT GCAGGCAATC GGCACGGATG CCAAGGGTCG TCGGCAATAC CGCTATCATA AAGACTGGCA CGCCGAGCGA GGCAAGGCCA AGTTCGAACG GCTGGCCGAT TTCGCGTCCA GACTTCCTGA CCTGCGCGAA CGGGTCGACA TCGACCTTCG TTCGCGTGGC CTCAATGTCG AAAAGGCGCT GGCAACGGTC GTATGGATGC TCGATAACCT CTATATCAGA ATAGGGAACG CTGCCTATGC AGAGACGAAC AAGTCGTTCG GCCTTACCAC GTTGCGCAGT CGTCACGTGA GCGTCGAAGG CGGCAGTCTC AAATTTCGGT TCAAAGGTAA ATCCGGCAAG GAATGGAATC TTGCCCATAG TGACCGGCGG ATCGCCAATG TCGTGCGAAA ACTACAGGAA CTTCCAGGAC AACACCTCTT TCAATACGTT TGCGATCAAG GCGGATGCAG ACCCATCTCC TCACATGATG TGAATGCCTA TATCCGAGAG ATGACAGGTG ACGATTTCAG TTCACGCCAG TTCAGAACGT GGGGCGCAAC CTGCATGGCA GTGGATGCAC TGGCTTCTGC CGAGGCCGCC ACGACCAAGC GCGAGTTGGC CCGTCAACTC AATGCAGCGA TTGACGCAGT CGCTGCGAAA CTGGTCAATA CCCGATCGGT CTGTCGGTCT TCCTACATAC ATCCCGCCGT GTTCGAAGAC TTCCAAGCGG GTACGCTTCG TGATGTCCTT AAGTTGAAAA CCACGAGTGA ACGACTTCTT CAATGGATGG ATGAAGGCGA GATCCAAGTG CTAAAATGGC TGAAGAAACA AACAGTATCC AATAGCTAG
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Protein sequence | MGARGFLYYR PDGRRITQAD EIARLNSLAI PPAYTDVVIS TNPFSHLQAI GTDAKGRRQY RYHKDWHAER GKAKFERLAD FASRLPDLRE RVDIDLRSRG LNVEKALATV VWMLDNLYIR IGNAAYAETN KSFGLTTLRS RHVSVEGGSL KFRFKGKSGK EWNLAHSDRR IANVVRKLQE LPGQHLFQYV CDQGGCRPIS SHDVNAYIRE MTGDDFSSRQ FRTWGATCMA VDALASAEAA TTKRELARQL NAAIDAVAAK LVNTRSVCRS SYIHPAVFED FQAGTLRDVL KLKTTSERLL QWMDEGEIQV LKWLKKQTVS NS
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