| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7272 |
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| Symbol | |
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| ID | 7380498 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011981 |
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| Strand | - |
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| Start bp | 227162 |
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| End bp | 228748 |
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| Gene Length | 1587 bp |
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| Protein Length | 528 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643641362 |
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| Product | ABC-type dipeptide transport system, periplasmic component |
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| Protein accession | YP_002539659 |
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| Protein GI | 222102620 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTTCAG AGATCAATCG CCGTCGCTTC CTGCAAGGAA CCGTCGGGGC GGCCGCTGCC
GCAGGCTTTA TGCAGATGAA CCCCGACTTC TTCATTTCCT CAGCCTTTGC CCAGTCGGGC
AAGACCATGA CGTTTCTCTC TGCCGAAAAC ATCACCGGCA ACTGGGACCC GACGGCCCAC
ACGACGCTCT CGCAGAAAAA TATCGAGGGT TTCGTCATGG GCTTCCTGAC GCGCTCACCG
ATGAAGCTCG ATAATCCCGG CGAGGTGGTC TACGAGCTGG CAACCGACAT CAAGCTGCTG
GATGCACATC GGTTGCAGAT AACGCTGCGG CAGGGCATCA CTTTTCATGA TGGCAAGCCG
TTCAAGGCCG AAGATGTCAA GGCAACTTTG GAATATGGCT CGAGGGCCGA TCGTCCGGCC
CAATGGTATC CAGGACCGAC CGAAACCCTG ACCATCGAAA CACCGGACGA CTACACCGTC
ATTATCGACA CCTCCAAGGG TGGTTATCCG GCCCATCTCT TCATCTTCCT CGCCTCTTTC
CTTCCAATGA TGTCGGCAAA GGACGTGGCA GGTGGCCCGG GTGGGGTTCT CTCTCAACGC
TTGAATGGCA CGGGACCGTT CAAATTCGTT GAGCAGCGCG GCAATGACAC GGTGATGGTC
GCTTTCGATG GCTATTTCAA AGGCAAGCCA GGCATTCCCG GCATCAACTT TACTTTCACT
GGCGATTCCA CCACGCGCAT GCTGTCGCTG ATGAATGGTC AGGCTTCGAT TGTCGAGCGT
CTGGAGCCGG AACAGGTGGC AACCTTGAAA GGCAATCCGC AAATCGCCAT CAACGAGGTG
GTTTCGGTTG AAAACAAATA TCTTTGGTTC CGGTGCTCCA AGCCACCTTT CAACGATCCG
CGCGTCCGGC TGGCAGCTTG CCACGCCATC GACCGTGACA TGATCCTCGA AGTGCTCGGA
TCGGCAGGCC ATGCATCTTC CAACTTCGTG TCACCGGTCA AGTTCGGCTA TGCCGATCTG
GAGAATTATC CGAAATACGA TCCAGAAAAG TGCCAGGCAC TGCTGGCGGA AGCTGGCTTT
CCAAACGGTA AGGGCTTGCC GCCCTTGGAA TATATTACCT CGGTTGGGTT CTATCCCAAG
ACCAAGGAAT ATGGCGAGGT GCTAACGGGC ATGCTGAACG AACAGGGCTT CCCCGTCAGC
CTGACCGTGC TGGAGCCTGC GGCATGGAAC GAGCAATTGT ACGATCGCCC AGGCGGCGGA
CCCGGCCATA TGGTCGATTG CGGCTGGTCA ACCGCATCAC CGGAGCCCGA TCTTGTTCTG
CGAACGCACT TCCATTCAAG CTCCAAGCGC ATTTGCGGCA TTGTCGACAA GGACATTGAT
GCAAGCCTCG ACAAGGAGCG CAATGCGGCA AACCTGGAAG AGCGCAAAAA AGTTCTGCAA
TCCGAAACGA TGCCTTTGAT CGCTTCGAAA ATGCCGGCCC TGTCGCTGTT CACCTCTGTC
ATGATCCACG CCATGCAAAA GGAGTTCAAG GAAGGCCTCT ACATCTATCC TGACGGGTCC
ATGGACGCTT CAAAGCCTGC GGCATGA
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| Protein sequence | MSSEINRRRF LQGTVGAAAA AGFMQMNPDF FISSAFAQSG KTMTFLSAEN ITGNWDPTAH
TTLSQKNIEG FVMGFLTRSP MKLDNPGEVV YELATDIKLL DAHRLQITLR QGITFHDGKP
FKAEDVKATL EYGSRADRPA QWYPGPTETL TIETPDDYTV IIDTSKGGYP AHLFIFLASF
LPMMSAKDVA GGPGGVLSQR LNGTGPFKFV EQRGNDTVMV AFDGYFKGKP GIPGINFTFT
GDSTTRMLSL MNGQASIVER LEPEQVATLK GNPQIAINEV VSVENKYLWF RCSKPPFNDP
RVRLAACHAI DRDMILEVLG SAGHASSNFV SPVKFGYADL ENYPKYDPEK CQALLAEAGF
PNGKGLPPLE YITSVGFYPK TKEYGEVLTG MLNEQGFPVS LTVLEPAAWN EQLYDRPGGG
PGHMVDCGWS TASPEPDLVL RTHFHSSSKR ICGIVDKDID ASLDKERNAA NLEERKKVLQ
SETMPLIASK MPALSLFTSV MIHAMQKEFK EGLYIYPDGS MDASKPAA
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