| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7268 |
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| Symbol | |
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| ID | 7380494 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011981 |
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| Strand | - |
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| Start bp | 222521 |
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| End bp | 223282 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643641358 |
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| Product | transcriptional regulator DeoR family |
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| Protein accession | YP_002539655 |
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| Protein GI | 222102616 |
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| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
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| COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.254558 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGTTTTA CGGAAAACCG CATCAAACAC ATTCTGGAGA TGCTGAAACT GCATCAAAGA
GTGACTGTTG TTGCACTGTC CGAGCAGTTG CAGGTCAGCC ACGAATCCAT CCGTCGCGAT
TTAAAGGAGC TGGAGATCCG TGGCTATGCG CGTCGGGTCT ATGGTGGCGC CGTAATCGAC
GGACATGACA GCGACCAACC GTTCGGTGAG CGTATCCGTG TCAGCGCCCG GGAAAAAGCT
CGCATCGGCG AGGCTGCGGC CTCCATGGTC GAAAACGGCA TGAAGATTTT TATCGATACC
GGCACCACGA CACTGGCCTG CCTGAAACAT CTGGAGTCCC GCAAGGATGT GACAATTGTC
AGCAACTCCA TTGCGGTTGC GGCCCATTTT TTCCCCTACC CCGATGCCAG CGTGCGGGTT
CTGGGCGGGC GCATGCGACC GGAATATCAG GCGACCTACG GCCATGAGAC GGTTGCGGCC
CTCAAGGAGC ATTTTTTCGA CCTGGCCATT ATCGCTATCA GTGCCATCCA CCTGGAGCGG
GGCTTTATGG ACTTTGGCGA GGATGAAGCC GTACTGCGCC GCATTGCCCG TGGGCAGGCC
AGCCGCTCCA TCATTGTGGC GGACAGCTCA AAATTCGGGC GGCTCGGCTC TATCCATACC
TTTGGCCTGA GCGAGATTGA CGCCGTGGTG ACCAGCGGTG TGCTGCCGAA AGACTTTTCC
GATTATTTTT CGCAATCAAA CGTGGACATC ATCAATGCCT GA
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| Protein sequence | MSFTENRIKH ILEMLKLHQR VTVVALSEQL QVSHESIRRD LKELEIRGYA RRVYGGAVID
GHDSDQPFGE RIRVSAREKA RIGEAAASMV ENGMKIFIDT GTTTLACLKH LESRKDVTIV
SNSIAVAAHF FPYPDASVRV LGGRMRPEYQ ATYGHETVAA LKEHFFDLAI IAISAIHLER
GFMDFGEDEA VLRRIARGQA SRSIIVADSS KFGRLGSIHT FGLSEIDAVV TSGVLPKDFS
DYFSQSNVDI INA
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