Gene Avi_7262 details

Gene Information

• Locus tag: Avi_7262
• ID: 7380488
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Agrobacterium vitis S4
• Kingdom: Bacteria
• Replicon accession: NC_011981
• Strand: +
• Start bp: 217980
• End bp: 218669
• Gene Length: 690 bp
• Protein Length: 229 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 643641352
• Product: transcriptional regulator GntR family
• Protein accession: YP_002539649
• Protein GI: 222102610
• COG category: [K] Transcription
• COG ID: [COG1802] Transcriptional regulators

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAGTCG GGAAGAGCAG TCTCTACGAC GATCTTAAAC GCCAAATTCT GACGATGGAA 
CTCGATCCGG ACGAGGATCT GGACGAAGTC AGCATCAGCG AGAAATATGG ACTGTCTCGC 
ACACCTGTGC GTGACATTTT CCGCCGTCTT GCGGGTGAAG GCTATATCGA CATTCGAGAA 
AACAGAGGCG CTCGGGTCGC TCCGTTGAAC CATTCGACAC TCAGACACTT CTTCCTCGTT 
GCGCCGATGA TATACGCGGC CATCGGTCGG CTGGCGGTTC AAAATTTCAA ACCCAAGCAA 
CTGTCCGAGT TGAGTGACAC ACAGGAACGA TTTCGTGCCG CTAGCCACAA CGCTGACACC 
CTGGCAATGG TTCTGGAGAA TAACAGATTC CACGCCATCA TGGGCGAAAT GTCCGGTAAC 
GTTTACCTGC AACCGAGCTT AAGACGTCTT CTCGTGGACC ATGCCCGTAT AGGGCAAACC 
TTCTTCCGTC CACGAAATGA TGACATGCAG CAGCGTCTTC GGTTGGCAAC CCAACATCAT 
GATGGCTTTA TTGCATCCAT TAAAAGCCAT GATGAAAATG CTGTGGTTGA TCTCGTTTTC 
CAGCATTGGG AATTGTCACG AGAGAACATG GAATTGTATG TTGTGCCTGA TAACATGACA 
GCGGATTTAC CTGTTAAATT GGCACCGTAA 

 

Protein sequence

MKVGKSSLYD DLKRQILTME LDPDEDLDEV SISEKYGLSR TPVRDIFRRL AGEGYIDIRE 
NRGARVAPLN HSTLRHFFLV APMIYAAIGR LAVQNFKPKQ LSELSDTQER FRAASHNADT 
LAMVLENNRF HAIMGEMSGN VYLQPSLRRL LVDHARIGQT FFRPRNDDMQ QRLRLATQHH 
DGFIASIKSH DENAVVDLVF QHWELSRENM ELYVVPDNMT ADLPVKLAP