| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_6265 |
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| Symbol | |
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| ID | 7381305 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 1258297 |
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| End bp | 1259109 |
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| Gene Length | 813 bp |
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| Protein Length | 270 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643649727 |
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| Product | transcriptional regulator DeoR family |
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| Protein accession | YP_002547951 |
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| Protein GI | 222107160 |
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| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
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| COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACGAAC GCGAACGCCA TCGCATTATA CTCAGCGCCA TACAGGAAAA GCCTGTGGTG
ACGGTGCAGG ATATTGCCGA ATTGACGGAT GCGTCCGAAG CAACCATCCG GCGCGACATT
GCATCCCTGC ATGTCCAGGG GAAATTACGC CGGGTGCGGG GTGGGGCGGA AGCAGTACAT
CCTCCGCAGC AGGGCAATCT GGCGGCCCGA CCGTTCAGGG TGTCGGAATC GGTCAATATC
GATAAGAAAC GCGCAATTGC GCGCGCCGCT GTTGAACTCT GCGAGGAAGG CGATTCGATC
ATCATCAATG GTGGAACGAC GACCTTTCAG ATGGTGCATT TCATGTCAGC GCGTCGCTTG
CAGGTGATGA CCAATTCCTT TGCCATCGCC GAGCATCTGG TCAAACATTC GAAATGCACG
ATCAATGTGC CGGGCGGCGC GATCTACCGG GATCAAAGCC TGATCCTGTC GCCTTTCGAG
AATGATGCGA TCCGCAATTT CTATGCCCGC CGGATGTTCA TTGGTGCCCA GGGCATTTCG
GCGCTAGGCG TGATGGAGCC GGATGCGCTG GTGATCCAGA GCGAGCAACG GTTGATGCGC
CAGGCCGACG AGCTGATCGT TATGGTCGAT TCGACGAAAT TCACGCGGCG GTCCAGCATG
ATTTTATGCG GGCTGGATGC GGTCTCAACC ATCATCACCG ATGACGGCGT GCCTGAAGAG
GCAGCCCATA TGGTGGAGGC GGCTGGAATA AAGCTTTTGA CGGTCCGGGC TTCGACCTCG
GCCGACAGGG AGGACGCCCC TTCGGTCGCT TGA
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| Protein sequence | MHERERHRII LSAIQEKPVV TVQDIAELTD ASEATIRRDI ASLHVQGKLR RVRGGAEAVH
PPQQGNLAAR PFRVSESVNI DKKRAIARAA VELCEEGDSI IINGGTTTFQ MVHFMSARRL
QVMTNSFAIA EHLVKHSKCT INVPGGAIYR DQSLILSPFE NDAIRNFYAR RMFIGAQGIS
ALGVMEPDAL VIQSEQRLMR QADELIVMVD STKFTRRSSM ILCGLDAVST IITDDGVPEE
AAHMVEAAGI KLLTVRASTS ADREDAPSVA
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