| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_6258 |
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| Symbol | |
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| ID | 7381299 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | - |
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| Start bp | 1251069 |
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| End bp | 1252391 |
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| Gene Length | 1323 bp |
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| Protein Length | 440 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643649721 |
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| Product | two component sensor kinase |
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| Protein accession | YP_002547945 |
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| Protein GI | 222107154 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0553015 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCAAGC CAAGCATGAC CCGCAAACTT CTCCTGTGGC TTTCCGGCGC GATTACCGTG
CTTTGGCTGG TGGCGGCAAG CTGTGGCGCC ATTGTCATGC AGGCTGAATT TGGCGAGATT
TTCGACAGCG CCCTGCAGGA GACCGGCGAC AGGCTTCTGC CATTGGTCGT CGATGACATC
ATGCAGCGCG ACCCGCTGAA AAGCCCCGTG CAAATCCTCA GCACTGTCGA TCCCAATTCC
GATGGATACC TTATCTATCA GGTGAGGGAC GCCAGCGGTC GAGTGCTGAT GCACTCCCAT
ACCGAGGCAG CAGCCCCGCT ACCAGCGCCG CTGACACCCG GTTTCTGGCA AAACGACAAA
TACCGGATCT ATACGACCAC AGCGGTCAGC GACACGATCA TCGTTCAGGT GGCCGACTCG
ATGAAACATA GGCATATCTC GGCTCTTGCG GCGGGTCTTG CCATGTTGCT GCCAGTGATT
GCGCTCGTCC CCCTCAGCGT TTTAGCCGCC TGGTTGATCA TCCGCCGTTC CCTGCTTCCC
GTTGAACAGT TTCGGCAGGA AATCAGCGGG AAGGACCACG GCAATCTGGT GGAAATCGAC
CTTAGCCCGC TGCCCAAGGA ATTGCAGCCC ATAGGACGTT CCGTCAATCT TCTGCTCACC
CGATTGCGGG CCGCTTTGGA CGCCGAGCGC GAATTTACCG CCAATAGTGC CCACGAATTG
CGCACCCCCA TTGCCGGCGC TCTGGCCCAG ACGCAATTGA TGCTGTCCCA GTTGAAGGAG
CCGGAAGCCC GCGCCCGGGC AAGTCAGGTG GAAACCTCCC TGCAAAAACT TGCGGGCCTG
GCGGAAAAAC TATTGCAATT GTCTCGTGCA GAAGCGGGCA TCGGCTCGAC CGGGCAGCCT
GTCGATCTGG TACCCGTGCT CGATCTTGTC GTGGAGGATT TCCAGCGCGC CACGGGAAAT
GCCATTGTTT ATCGACACCC GCCAACAGCA ACCTTGCCAC GCGCCGTCAG CGAAGATGCC
TTTGCCATCG TCATCCGTAA CATGATCGAG AATGCTGTGC GACATGGAAC ACAGGGCGCG
CCAGTTGAGG TGACGCTTAG CGAAGATGGT ACGATCCGCG TCGTCAACGG TTCACCGGTT
TTGCCACCCG AACAATTGAT AGCCATCCGA AAACGCTTCC AACGTGCCAA TGCCACCACG
CCCGGATCGG GCCTCGGCTT GTCGATTATC GAGCGTTTGG CAGAGCAGAT GAATGCCCGC
TTCGACATCC TGTCACCCGC TAGCGGGCGA CAGGATGGAT TCGAGGCCCG CCTCATGATT
TAA
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| Protein sequence | MTKPSMTRKL LLWLSGAITV LWLVAASCGA IVMQAEFGEI FDSALQETGD RLLPLVVDDI
MQRDPLKSPV QILSTVDPNS DGYLIYQVRD ASGRVLMHSH TEAAAPLPAP LTPGFWQNDK
YRIYTTTAVS DTIIVQVADS MKHRHISALA AGLAMLLPVI ALVPLSVLAA WLIIRRSLLP
VEQFRQEISG KDHGNLVEID LSPLPKELQP IGRSVNLLLT RLRAALDAER EFTANSAHEL
RTPIAGALAQ TQLMLSQLKE PEARARASQV ETSLQKLAGL AEKLLQLSRA EAGIGSTGQP
VDLVPVLDLV VEDFQRATGN AIVYRHPPTA TLPRAVSEDA FAIVIRNMIE NAVRHGTQGA
PVEVTLSEDG TIRVVNGSPV LPPEQLIAIR KRFQRANATT PGSGLGLSII ERLAEQMNAR
FDILSPASGR QDGFEARLMI
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