Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_6201 |
Symbol | |
ID | 7381254 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011988 |
Strand | + |
Start bp | 1201345 |
End bp | 1203510 |
Gene Length | 2166 bp |
Protein Length | 721 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 643649676 |
Product | hypothetical protein |
Protein accession | YP_002547900 |
Protein GI | 222107109 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.147452 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGATCC TGAAAATCAC TCTGCTTGGC TCGGCTGCTG TTCTGGCGCT GACATTGCCA GCCCATGCTG ACCCGATCAG CACGGCATTG GGCAGCTTCA TCTTTCAGTC GCTGTACACG ATTGGCGTTT CCGGCGCGGT GGCCAATTTT GTTGCGGTCA ATGGGCTTGC GCTGCTGGCG GTGGCCGGGT CTGTCGCATC GAGTTTTTTT GCAACGAAGG GGTCGGTTAA ACCGTCCGAT GCCAAGTCTA CCTATTCGAC CGAGGAAAGC TCGGTTCGGG AAGGTATCGG CTACACGACA GGCGCTGGCG TCAAATTCTA CGGCAACACG GATGGCTCAA CCCGCTGGCG GTTGAATGGG CATACCGTTG GCCCGATTGA TGCAATTACC GAATATTACC TTGGTGAAAA GGAAGTGGTG ATCGATGACG ATACCGGCTA TGTGACATCG CCGCCGTGGC CAAAGTCGGA CGGCACAAGC TGGGCAAAGA TTGAGCATAA AGCGGGTGGC GGCGGCGAAA CGGCCTGGCC TGCGCTGGTT GCGGCCTTTC CTGGCAAATG GACATCGGCC CATAAGGTTG AGCGGACTTT TCAGACGCTA TCGACATTTT ACAACCCGGG CCTGGAAAAA GAGAAATACC TTTCGCTGTA TCAAGGCGGC GTGCCAGAGC TGCGGGTGGT TTACCGGGCA TCGCTGGTTT ACGACGCGAC CGACGAAAGC CAGGACTCCA CCAATGACGC GACGTGGCGT TGGACGGACA ATAGTGTCTG GTGCATCATC CATGTGATGC GCCGCGATCC GCGGCTGTTT TCGCCTGACA TGTGGGATTG GACGCTCAAC ACGTTGACGG CGGTCAAGTG CGATACCCAT GTGGCGACCC TGACCGGTAC GGAAAAGCGG TCTCGGCTTT GGGGGCAGTG GAACTATGAG GATAAGCGCA ACGATACCGT TCAAAGCATG CTGGATAGTG CTGGACTGGT GATCCGCACC ACGCAGGCGG GCAAGATCTA TCTCGATATG ATTGATGATG CGCCGGTTGC GGAAATCAGC TTCACCGATG ACGATATTGT TTCCGATGAC TGGAGCGGCG GACCGGAGGC GGTGGATCGT CCCAACGTCT GTCGGGTGAA ATATTATTGC GAACCGCGTG ATTTCGAGGT CGCGGAAATA GACATGACTG GCATCGCCTG GGCGCAGATT GACGATGAAG TCACGCGCTA TGGTGAGAAA TTTCACGATG TCGAACTGTC TTATTGCCCC TCGGCAAGCC AGGCGCAGCG CATTGCCCGG CGGCTGTTTG CTCTTGAGCG TGCCGAAACC TATTCGGCCA CCATGAAGAT GGTGGGCATG GCGGCGTGGG GGCTGCAATA TGCTGAGATC CAGACTGAGT ATGATGACAC GCCGCGCCTG ATGCAGTTGG GCGCACCGGA AATGAATGAC GATGACGGCA CGGTCTCGAT CTCTGGGAAA TACTGGCCTG AATTGTCGGC CTGGAACCCA GCAACAGATG AAGCCGCCGC CCCGGAAGAT ACACCGGCCC TCAACTATGT GGCCGATATC GATCCACCGG GGCCGCCGAC TTATGCGGTG CAAACCACGG CTCCAGACGG CACCAGACAG TTGCGGTTGC TTTATTCCGT CTCAGGGTCG CCTGATGTTG TCGAGGTGAA TTACCGCTCC TATTCCGGTG GGTCGCCAAG CTCCTGGCGC TCGATGACGG AGCGGTCTGG CGTCGCTTAT GTAGCGCTCA CATCCGATAT CCTTGGGCAG ACGATTGATG CGCGGGCGCG GGTTTTTGAG GATGAAGAAG GTTCGGATTT CTCAACGACT GCGAGCCTTG TCGTCGGAGT TGATAACGGG TTGCCACCAG CGCCGTCGCT TGTGTCGGGC GGAATAACTG TCGATGGGAC AACCGCCACC CTTAGTGTGT CGGTTGTCAG TAATGACTTC CGGGTTGCGG CCATCCGCCT GATGTATGGG CCGACTGTGC TTCAGACTGT AGCGGTTTCG CCCGGCGTTG CCATTGGCTT TTCAAACACG ACCTCCGTTG GATCTGGTGG CGGCACAGTC GAATGGAAAA TCTACGGCGT CGTCACCAAC GGATCAGTTG GCGCTGCGCT GACGCTTTCG GCCTACATCC CAGATACCGG CGGAGGTAGC GACTAA
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Protein sequence | MKILKITLLG SAAVLALTLP AHADPISTAL GSFIFQSLYT IGVSGAVANF VAVNGLALLA VAGSVASSFF ATKGSVKPSD AKSTYSTEES SVREGIGYTT GAGVKFYGNT DGSTRWRLNG HTVGPIDAIT EYYLGEKEVV IDDDTGYVTS PPWPKSDGTS WAKIEHKAGG GGETAWPALV AAFPGKWTSA HKVERTFQTL STFYNPGLEK EKYLSLYQGG VPELRVVYRA SLVYDATDES QDSTNDATWR WTDNSVWCII HVMRRDPRLF SPDMWDWTLN TLTAVKCDTH VATLTGTEKR SRLWGQWNYE DKRNDTVQSM LDSAGLVIRT TQAGKIYLDM IDDAPVAEIS FTDDDIVSDD WSGGPEAVDR PNVCRVKYYC EPRDFEVAEI DMTGIAWAQI DDEVTRYGEK FHDVELSYCP SASQAQRIAR RLFALERAET YSATMKMVGM AAWGLQYAEI QTEYDDTPRL MQLGAPEMND DDGTVSISGK YWPELSAWNP ATDEAAAPED TPALNYVADI DPPGPPTYAV QTTAPDGTRQ LRLLYSVSGS PDVVEVNYRS YSGGSPSSWR SMTERSGVAY VALTSDILGQ TIDARARVFE DEEGSDFSTT ASLVVGVDNG LPPAPSLVSG GITVDGTTAT LSVSVVSNDF RVAAIRLMYG PTVLQTVAVS PGVAIGFSNT TSVGSGGGTV EWKIYGVVTN GSVGAALTLS AYIPDTGGGS D
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