| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_6196 |
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| Symbol | |
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| ID | 7381250 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 1197356 |
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| End bp | 1199635 |
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| Gene Length | 2280 bp |
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| Protein Length | 759 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643649672 |
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| Product | phage tail protein |
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| Protein accession | YP_002547896 |
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| Protein GI | 222107105 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01760] phage tail tape measure protein, TP901 family, core region |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGTCGG TCGGCAAGAC CTTGTCTGTC GGGTTGACGG CGCCGATTGC GGCCTTTGGC
ACCTTGACTG TTAAGACGGC GGGGGATTTT CAGGCGGCGA TGAACCGCGT TGAGGCTGCG
ACCGGTGCGA CGGCAGCAGA GATTGCCGAC ATGCAAAAGA TGGCAATCAA GCTAGGTGCG
GACACCACCT TTTCCGCCTC TGAGGCCGCC AATGCTATGG AAATGCTGGC GAAGAATGGC
TTGACTGCCA GCCAGATCAT GGGTGGGGCG GTGCAGGCCA GCATGAAGCT GGCGGCGGCA
TCCGGCGGGG AGCTGGCGGC ATCTGCTGAC CTTGTTACTG ACGTGATGAT GAATTTCGGG
AAAAACGCCA AGGATCTGAA TCCGGTTATC GATGGGATAA CCGGCGTTCT GCTGCAATCG
AAATTTGGCT TTGACGACTA TCGTCTTGCA ATAGCGCAGG CTGGCGGCGC GGCTGGCAGC
CTTGGTGTCT CTTTTGATGA TTTCAATGCA TCAATTGCGG CCACCAGCTC GGCTTTTTCT
AGCGGCTCTG ATGCTGGTAC ATCCTTCAAA ACATTTATCA CCTCGCTGGT ACCAAAGTCC
AAAACGGCAA GAGCCACCAT GCGTCAGTTG GGCTTGGAGT TTTTCGAGGC TAACGGCTCG
ATGAAAGACA TGTCCGCTAT CGCGGAACAG CTAAAAACCA AGATGTCGGG CCTGTCTGAT
GAAGGGCTCA TCGAGGCCAT GAATGATCTT TTTGGCGTTG ATGGTATGCG GACGGCCATC
ATGCTGATGA AGACCGGGGG CAAGGGTATT GATGAGCTGA AAGCAAAGAT TGCTAAGGCC
TCTGCTGCCG ATCAGGCCGC GGCGCGGTTG AAAGGCTTCA ATGGCGAATT GGAGCAGTTG
GGCGGCGCCT TCGAAAGTTT GCAGATTGCC ATTGCCAATA GCGGCTTACT CTCGTTGCTG
ACGGAAATGG TAAAGTCGCT TGCGGATTGG GTTGCGAAAC TGGCGGAAAC CAACCCGGAA
ATCCTGAAAT GGGGAACGGC GGTCGCTGCA CTCGCTGCGG TTCTCGGTCC TGTTGCGGTT
GGTATCGGCG CTGTCGTTGC GGTGATTGCC GCTATTGGCG CACCGATTGC GTTGGCGGTG
GCTGGTGCCG CAGCATTGGC GGCGGCGGCT GTGGCGGTTT ACACCAATTG GGATACGATC
AAGACGCAAT TTCCGACCAT TGGCGCGATT GTCGAGGGCG CAATTGGTGT GATCAGCGCG
ACGTTGACAG CGTTGAACGC CAATGCGCAC TCGATTGTTG CCGGTATTGT CGCGCTGTTT
ACCGGGGATT TTGCCGGGGC ATTTACCGCC ATACAGCAGA TTGCCCATAA CTTCGCGGAT
CTATGGCTCA ATATTGCCGA GGTAATTTTC CCTGGCGCCA AGGCAGCAAT CATTGCTGGG
GTGCAGTCTA TCGGCGCATC CATGGCAACC TTTGGATCGC AGATCCTTTC GACATTCGTC
AACCTGGGCG CTGAAATGGT GGTGATTGGC GAGCAGATCA TGGCCGGGCT TTGGCAAGGC
ATTCAGAACA AGTGGCAATC GGTCAAGGAA AGCGTGACCA GTATTGCCAG TGGCATCAAG
AGCACCTTCA CGGAATTCTT TGACATCAAC TCGCCTTCGC GCGTGATGAC CACACTTGGC
GAATATATCA CGCAGGGCCT TGGTGATGGT ATCGCCAACG GCAAAGGGCA AGCCGTATCC
TCTGCAACGG ATGTCGCCAA TGGTGTTTCC GGCGCATTGT CGAATATCGA CACAGCAGGA
TCTGGCTTGG CGAAGAACAT GGATAATGCT TTTTCGTCCA TCGGTTCCGG GCTGGCGGAT
GCGATCAAAG GCACAAAGAG CTGGGGCGAT GTTGCCAAGG GCATCCTTTC ATCGCTGGCG
CAATCGCTTA TCGGCACAAT GGGCGGCGGC GGCGGGGTTG GTGGATCGCT GCTCAAGGGC
CTGTTTTCCG GCCTGACCGG CTTTGCCAAT GGCGGCACGA TCATGCCGGG GGGCAATGGT
GCGGGGATTG ACAGCCAAGT AGTGGCGTTT CGCAAAAGCC CGACTGAGCA GGTCGATATC
CATGACCCGC GCAAAAGCAA GAGTAGTGGC GGCGGTGACC GTTACTACTC TATCGATGCG
CGGGGCGCTG ATCAGGGTGC TGTTTCCCGG ATCGAGGCTG CCTTGAAAAA GGTGGATGGT
TCGATTGAAA AGCGGGCGGT TGCCGCACAA AACTTTAGCA ATAAGCGGAA ATACATCTGA
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| Protein sequence | MESVGKTLSV GLTAPIAAFG TLTVKTAGDF QAAMNRVEAA TGATAAEIAD MQKMAIKLGA
DTTFSASEAA NAMEMLAKNG LTASQIMGGA VQASMKLAAA SGGELAASAD LVTDVMMNFG
KNAKDLNPVI DGITGVLLQS KFGFDDYRLA IAQAGGAAGS LGVSFDDFNA SIAATSSAFS
SGSDAGTSFK TFITSLVPKS KTARATMRQL GLEFFEANGS MKDMSAIAEQ LKTKMSGLSD
EGLIEAMNDL FGVDGMRTAI MLMKTGGKGI DELKAKIAKA SAADQAAARL KGFNGELEQL
GGAFESLQIA IANSGLLSLL TEMVKSLADW VAKLAETNPE ILKWGTAVAA LAAVLGPVAV
GIGAVVAVIA AIGAPIALAV AGAAALAAAA VAVYTNWDTI KTQFPTIGAI VEGAIGVISA
TLTALNANAH SIVAGIVALF TGDFAGAFTA IQQIAHNFAD LWLNIAEVIF PGAKAAIIAG
VQSIGASMAT FGSQILSTFV NLGAEMVVIG EQIMAGLWQG IQNKWQSVKE SVTSIASGIK
STFTEFFDIN SPSRVMTTLG EYITQGLGDG IANGKGQAVS SATDVANGVS GALSNIDTAG
SGLAKNMDNA FSSIGSGLAD AIKGTKSWGD VAKGILSSLA QSLIGTMGGG GGVGGSLLKG
LFSGLTGFAN GGTIMPGGNG AGIDSQVVAF RKSPTEQVDI HDPRKSKSSG GGDRYYSIDA
RGADQGAVSR IEAALKKVDG SIEKRAVAAQ NFSNKRKYI
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