Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_6079 |
Symbol | dadA |
ID | 7380733 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011988 |
Strand | - |
Start bp | 1102029 |
End bp | 1103294 |
Gene Length | 1266 bp |
Protein Length | 421 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 643649576 |
Product | D-amino acid dehydrogenase small subunit |
Protein accession | YP_002547801 |
Protein GI | 222107010 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGTTA CCATTCTGGG CGCGGGCGTC ATCGGTGTCA CCAGTGCTTA CTATCTCGCC AAAGCCGGGC ATGAAGTGAC CGTCATCGAC AGGCAGACGG GTCCGGCCCT GGAAACCAGC TTTGCCAATG CGGGAGAAGT GTCCTTCGGC TACTGCTCGC CCTGGGCAGC GCCCGGCATT CCGCAAAAAG CGTTGAAATG GCTGTTCATG GAACATGCCC CGCTGATCCT GCGACCGAAA ATCGATGCTG CCATGCTGGG TTGGATGCTG AGAATGCTCT CTAACTGCAC CTCCGGGCGC TACGCGATCA ACAAAAGCCG GATGCTGCGG CTGGCCGATT ACAGCCGGAT TGCGCTGGCG CAGCTGCGCA CCGAGACCAA TATCGACTAC GACCAGCGCA TGCAGGGCAC TTTGCAGCTG TTTCGAACTC AGGCGCAGCT GGATGCCTCG GCGAAAGATG TGAAAGCACT GGCGGCGGAC GGTATTCCCT ATGAAGTGCT GGACCGTGAA GCCTGCATCC GGGTCGAGCC TGCCTTGGCG GCAGCCCGCC ATAAAATCGT CGGCGGCTTG CTGACGCCGA AGGACGAGAC CGGCGACTGT TTCAAATTTA CCAATCAGCT CGCTGAAAAG GCCGCCTCGC TTGGCGTGGT GTTCGACTAT GGCCGCAGCA TAGAACGGTT GGTGGTGTCG GGGGGCAAGG TCACCGGCGT TGTCACCGAC AGGGGAACCG AAACCGCCGA CGCCTATGTC GTGGCACTCG GCAGCTATTC GCCACTGCTG TTGAAGCCGC TCGGCATCAC ACTGCCGGTC TATCCGGTCA AGGGCTATTC GCTCACCATT CCAATTGTCG ATCCATCGAA ATCCCCCGAA TCCACCGTGA TGGACGAGAC CTACAAGATC GCCATCACCA GGTTGGGCGA CCGGATCAGG GTGGGCGGCA TGGCCGAAAT TTCCGGTTAT ACCAATGATC TGGGTGCCGC GCGTCGCCGC ACACTCGAAC ATTCCGTCAC CGACCTGTTT CCCGGCGGCG ATATGGGGCG AGCCGATTTC TGGTCAGGCC TTCGCCCGAT GACGCCGGAT GGCACGCCAG TGATCGGCGC AACCGGCATC AGCAATCTCT ATATCAACAG CGGCCATGGA ACATTGGGCT GGACAATGAG CTGCGGTTCA GGCCGTTTGC TCAGCGACAT CGTCAGTGGC CGCCAGACCG AGATCGACAA TGCCGATCTG GCACTGAGCC GCTATGCTGC CGGTCGCGTC GGATAA
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Protein sequence | MKVTILGAGV IGVTSAYYLA KAGHEVTVID RQTGPALETS FANAGEVSFG YCSPWAAPGI PQKALKWLFM EHAPLILRPK IDAAMLGWML RMLSNCTSGR YAINKSRMLR LADYSRIALA QLRTETNIDY DQRMQGTLQL FRTQAQLDAS AKDVKALAAD GIPYEVLDRE ACIRVEPALA AARHKIVGGL LTPKDETGDC FKFTNQLAEK AASLGVVFDY GRSIERLVVS GGKVTGVVTD RGTETADAYV VALGSYSPLL LKPLGITLPV YPVKGYSLTI PIVDPSKSPE STVMDETYKI AITRLGDRIR VGGMAEISGY TNDLGAARRR TLEHSVTDLF PGGDMGRADF WSGLRPMTPD GTPVIGATGI SNLYINSGHG TLGWTMSCGS GRLLSDIVSG RQTEIDNADL ALSRYAAGRV G
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