| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_6038 |
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| Symbol | bexD |
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| ID | 7380864 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 1052613 |
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| End bp | 1053755 |
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| Gene Length | 1143 bp |
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| Protein Length | 380 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643649541 |
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| Product | polysaccharide export protein |
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| Protein accession | YP_002547766 |
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| Protein GI | 222106975 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCAAGG TTTTGCCAGT TCTTTTGATT GCGATTTTGT CGAGCTGTGC AAAACCATCG
GATGGACCAA GTGCTGGGGC CATCCGCTCT GCGACGTTCC CGGGCAGTTC AAGCAAGGTG
CCGGTGATTG AGCTTTCCAA GGCGCCGGCT GTCACGGCTG CGGCACCGCA GTCTGGTTAT
TCAGCCTCCG AACCGGGTCT GTCGGTGCTT CGTGGCGCCT ATAATCAACA GAGACTGCGG
CCGGGCGATG TGTTTGACGT CACCTTGCTG GATACCGGCG AAGAAGGTCT TTTTTCCTCC
ACCCATAGTA GTACCCTTAA TCTTGGCCGC TTCACTGTCG ATCCGCAGGG CAGCGTCACC
ATGCCTTTCG TTGGCAAGCA GCGGGTGACG GATTCCACCC CGGAAGGCCT CCAAAATCGT
ATTGTCCAGG GCATGAAAGG CTCGGCGGTT AACCCACAGG CCGTCGTGAC AGTTGTCGAC
AAACCGTCCA GCGCCGTTCT GGTCAGCGGT GGCGTCAAGA CCCCCGGAAA AGTGGCGCTG
ACAGCGCGGC GTGAGCGGGT TCTGGATATC ATTTCGCAGT CAGGCGGGGC GTCTGTTGCA
CCGCAGGCCG CCAAGGTTAC CGTGGTGCGC GGTCGGGAAC GCGCAACGAC GACGCTGGAT
CGGGTGATGA GCGATGAAAA ACAGAATATC GTCCTGCTGC CAGGCGACCA GGTGATCGTC
GATGGTGAAC CGGCCAGCTA TACGGCCCTT GGTGCTTTCA AAAGCACGGG TGAATTCCAG
TTCGAAACCG GCAAGCTTAC CCTGGCTCAG GCGGTTGGCC GGGCTGGCGG ATTGCTGGAT
GACCGGGCCG ATGCCCGCAA TGTCTACGTG TTCCGCAACC AGTTGATCCA GGTTCCGGCA
TCGACGGTGA CGGCAAGTGG CGCCAAGGGA CCGGTAGCCA TGACCACCAG CAGCAAGCCG
GTAATCTATC ATGTGAATAT GAAAGATGCC TCCAGCATCA TGCTGATGCA ACTGTTCCAG
ATGCAGAAGG GCGATGTGCT CTATGCCAGC AATTCGGGCA TGGTTGATGC TGCCAAGTTG
CTGACCGTTT ACCAGAAAGT GCCGTCAACA TCGGCGGCAC CTCTCCCTGG CTCCTCCAAT
TGA
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| Protein sequence | MRKVLPVLLI AILSSCAKPS DGPSAGAIRS ATFPGSSSKV PVIELSKAPA VTAAAPQSGY
SASEPGLSVL RGAYNQQRLR PGDVFDVTLL DTGEEGLFSS THSSTLNLGR FTVDPQGSVT
MPFVGKQRVT DSTPEGLQNR IVQGMKGSAV NPQAVVTVVD KPSSAVLVSG GVKTPGKVAL
TARRERVLDI ISQSGGASVA PQAAKVTVVR GRERATTTLD RVMSDEKQNI VLLPGDQVIV
DGEPASYTAL GAFKSTGEFQ FETGKLTLAQ AVGRAGGLLD DRADARNVYV FRNQLIQVPA
STVTASGAKG PVAMTTSSKP VIYHVNMKDA SSIMLMQLFQ MQKGDVLYAS NSGMVDAAKL
LTVYQKVPST SAAPLPGSSN
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