| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5985 |
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| Symbol | exbB |
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| ID | 7380819 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | - |
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| Start bp | 996153 |
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| End bp | 997178 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 643649494 |
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| Product | tonB-system energizer ExbB |
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| Protein accession | YP_002547725 |
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| Protein GI | 222106934 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0811] Biopolymer transport proteins |
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| TIGRFAM ID | [TIGR02797] tonB-system energizer ExbB |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.70641 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGTATC GTCGCTCCTC TTCGCTCGCT CGCGTGAGCA TGACCGTGGT TATTGGCTCG
GGTCTGCTGA TAACCGGCAC GCTGATGAGT TCGTCCGCCG CCTTGGCCCA GCAAGGGACG
GCACCCGCGC AAACCACAAG CGAACCAGCC ACAGCCATGC CTGCGCAAAC GCCGGTACAA
GAGACGCCTG CGGCACCCAC CAATTTGACA GCCCCACCAG CGGATAACGG CACGCCAGCT
CCAGCACCCT CCCCCACAGA AGGCGTCGCA GTGGACGCTC CCGCCGCCGC AGTCCAGCGC
TCCGATATTC CCCACGATCT TTCCCCTGTT GGCATGTTCA TGGCCGCCGA TTGGGTCGTG
AAGTCAGTGA TGATTGCCCT TGGCCTTGCC TCCGTTGCAA CCTGGACCAT CCTCCTTGTC
AAAACTCTTC AGCTCTCCGG CTCAAAGGCG AGGCTGCGGC GCGGTCTGGC TGTGTTGCAA
GAGGCGCGAT CCCTCTCGCA AGCGGCAGGC GCATTGCAGA AACGGCGTGG CACCGTGCCG
GACATGCTGC TGATCGCTGC ACGCGAGTTG AAACTATCAG AGCCTGCGCT CGATTATGCT
GGCAATGACG GCGTCAAGGA ACGAGTAAGC TCGGCTCTGT CGCGGATCGA ATCGCGCGCC
GGACGCCGCA TGACAGCCGG AACCGGCATT CTTGCCACCA TCGGCTCCAT CGGCCCCTTT
GTCGGTCTGT TCGGCACCGT CTGGGGCATC ATGAATTCCT TCATTGGTAT TTCGCAATCG
CAGACCACCA ATCTTGCCGT CGTCGCGCCT GGTATTGCCG AGGCGCTGCT GGCCACGGCC
ATCGGCCTGG TTGCCGCCAT TCCCGCCGTG GTGATCTATA ACGTGTTTGC CCGCGCGGTG
ACCGGCTATC GCCAGCAATT GCTGGATGCG GCAACAGCGG TGGAACGGCT GGTCAGCCGG
GATCTCGATT TCCGCAAGGT GCCGGCCGAT GTGCGCGCCG CCCGCCTCAA GGTGGTGACG
GAGTAA
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| Protein sequence | MAYRRSSSLA RVSMTVVIGS GLLITGTLMS SSAALAQQGT APAQTTSEPA TAMPAQTPVQ
ETPAAPTNLT APPADNGTPA PAPSPTEGVA VDAPAAAVQR SDIPHDLSPV GMFMAADWVV
KSVMIALGLA SVATWTILLV KTLQLSGSKA RLRRGLAVLQ EARSLSQAAG ALQKRRGTVP
DMLLIAAREL KLSEPALDYA GNDGVKERVS SALSRIESRA GRRMTAGTGI LATIGSIGPF
VGLFGTVWGI MNSFIGISQS QTTNLAVVAP GIAEALLATA IGLVAAIPAV VIYNVFARAV
TGYRQQLLDA ATAVERLVSR DLDFRKVPAD VRAARLKVVT E
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