| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5972 |
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| Symbol | frcR |
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| ID | 7381056 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 988071 |
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| End bp | 989300 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643649484 |
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| Product | transcriptional regulator ROK family |
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| Protein accession | YP_002547715 |
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| Protein GI | 222106924 |
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| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
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| COG ID | [COG1940] Transcriptional regulator/sugar kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.248958 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAGAGG GAATGAATGC GGGTCTGGCC ATGCCGCCCG CTGCCCTCGA GACGAGTGGC
GGCGCCAATC AGGTCGGAGT GCGCGCCTAT AACGAGCGGC TGGTCATGTC GCTGGTGCGC
CGGCATGGCA GCCTGTCCAA GGCGGAAATT GCCCGGCGCA GCGGTCTCTC GGCCCAGACG
GTGACGGTGA TCATGCGGGT GCTGGAGCGC GAAAAGCTGC TGGTGCGCGG TGAGCCGGTG
CGTGGACGCG TCGGCCAGCC TTCGGTGCCA ATGCGGCTCA ATCCGGATGC GGTCTATTCG
TTCGGGGTCA AGATCGGAAG ACGCAGTGCC AACCTGGTGC TGATGGATTT CGTCGGCACG
ATCCGCCATG AGGTGCGTCG CACCTATCCT TATCCAATGC CCGGCCTCCT GCTGGATTTC
ATCGTCGGCG GCATTTCCGA TATTGAGGGC AGGCTTTCCG TAGCCGAGCG CGCGCGAATT
GCCGGTGTGG GCATTGCAGC GCCGTTCGAA TTGTGGAGTT GGGCGGAGGA AACCGGCGCG
CCATCAGAGG AAATGGATGT CTGGCGTGAG ACTGATCTCA AGGCCGATGT TGCGGCCCGG
ATCGGTTATC CGGTCTTCAT CCAGAACGAT GCGACCAGCG CCTGTGCAGC GGAATTGGTG
TTCGGGGTCG GGCCACACTA TCCGGATTTC GTCTATTTTT TCCTCGGCTC TTTCGTTGGC
GGCGGCATCG TGCTGAATTC CTCGCTGTTT TCCGGACGCA CCGGCACAGC TGGCGCGGTT
GGGCCGCTGC CTGTGCAAAG GCGCGATGGC AAAACCGTCC AGCTTTTGAA GATCGCGTCG
ATTTTCGTGT TGGAAAACCT GCTGCGTGAC TATGGACAGG ATAGCCAGTC CCTATGGTAT
TCGCCGAGCG ACTGGGTGGA CTATGGCGAG CCGCTGGAGA TCTGGATCCG CGATACCGCC
GCAGCGCTGG CCCAGGCGAT TGTTGCTGCG GCCTCGATCA TCGACTTTTC CGCCGCCGTC
ATCGATGGCG GTTTTCCGCA ATGGGTGCGC CAGCGTCTGG TTGTGGCTAT CCAGGAAGCG
GCGCGTGATC TCGACCTCCA GGGTGTATTG ATGCCCGAGA TCGTCGAAGG CGCCGTCGGC
CACCAGGCCC GGTCGGTTGG CGGTGCCAGC CTGCCGCTGT TTTCCCGTTA TCTTTTGGAT
CAGAATGTGT TGTTCAAGGA GTTACTGTAA
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| Protein sequence | MTEGMNAGLA MPPAALETSG GANQVGVRAY NERLVMSLVR RHGSLSKAEI ARRSGLSAQT
VTVIMRVLER EKLLVRGEPV RGRVGQPSVP MRLNPDAVYS FGVKIGRRSA NLVLMDFVGT
IRHEVRRTYP YPMPGLLLDF IVGGISDIEG RLSVAERARI AGVGIAAPFE LWSWAEETGA
PSEEMDVWRE TDLKADVAAR IGYPVFIQND ATSACAAELV FGVGPHYPDF VYFFLGSFVG
GGIVLNSSLF SGRTGTAGAV GPLPVQRRDG KTVQLLKIAS IFVLENLLRD YGQDSQSLWY
SPSDWVDYGE PLEIWIRDTA AALAQAIVAA ASIIDFSAAV IDGGFPQWVR QRLVVAIQEA
ARDLDLQGVL MPEIVEGAVG HQARSVGGAS LPLFSRYLLD QNVLFKELL
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