Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_5960 |
Symbol | |
ID | 7381045 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011988 |
Strand | + |
Start bp | 976882 |
End bp | 978231 |
Gene Length | 1350 bp |
Protein Length | 449 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 643649473 |
Product | N-formimino-L-glutamate deiminase |
Protein accession | YP_002547704 |
Protein GI | 222106913 |
COG category | [F] Nucleotide transport and metabolism [R] General function prediction only |
COG ID | [COG0402] Cytosine deaminase and related metal-dependent hydrolases |
TIGRFAM ID | [TIGR02022] formiminoglutamate deiminase |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGACAC TCCACGCAAA ACAGGCGCTA CTGCCAGATG GCTGGGCCAA GGATGTGCGG CTGATGCTGA AAGGCCGTAG AATTTCCGCC ATTGAGCGGG GTGTTGAGGC GCAAGCTGGC GACGAGCGGC ACGAGGTGTT GCTGCCCACA ATGGCGAACT TGCACAGCCA CGCCTTTCAG CGCGGCATGG CAGGTTTGGC GGAGCTCCGC GGGCCGGACA ATGACAGTTT CTGGAGCTGG CGCACGGTGA TGTATCGCTT TGCCCTGACC ATGAACCCGG AGCAGATGCA GGCCATTGCC GCCCAGCTTT ATGTGGAAAT GCTGGAGGTC GGTTTTGGCC GGGTGGGCGA GTTTCACTAT CTCCACCACG ACCGCGATGG CAGCCCCTAC AATAACCGTG CCGAGATGGC AGAGCGGATT GTGGGAGCAG CGGAAGAAAC TGGCATTGGC CTCACGTTGC TTCCGGTGTT TTATGCTCAT TCCGGCTTTG GTGGGCTTGC CCCCAATGAG GGCCAGCGGC GGTTTATTAA TGATCTCGAT GGTTTTGCGA AGCTGTTGGA GGGGGCGAAA AAAGCGGCAT CAAATCTGCC CGGTAACGTC ACAGGCATTG CGCCTCACAG CCTGCGGGCG GTGACACCGG AAGAATTATC AGCGCTGCAA CAGCTCTCCT TTGATGGACC AATCCATATT CATGTGGCCG AGCAGGTCAA GGAAGTGGAC GATTGCGTGG CGTGGTCTGG AAAGCGTCCC GTCGCGTGGT TGCTGGACAA CGCTGATCTC TCATCCCGCT GGTGCCTGAT CCATGCCACC CACATGACGG ACGACGAAAC CATGCGGATG GCAAAAAGCG GTGCCATTGC CGGGCTTTGC CCGATCACTG AGGCCAATCT GGGCGATGGC ACGTTTAATG CTGAGGTTTT CTTGGGGCAG GGTGGGCGCT TTGGTATCGG CTCTGATTCC AACATTCTGA TTGGCATTGC CGATGAGCTG CGCCAGCTGG AATATTCGCA ACGTCTCGCT CACCGCGCCC GCAATGTCAT GGCCGTTCCC GGTGGATCAA CCGGGCGGTA TCTGTTTGAC GGTGCCGTGG CAGGTGGCGC TGCGGCGTTG ATGGCAGAGA GTGGGCTGTC AGCGGGCAAG CCTGCCGATC TCGTCAGTCT CAAGTCGCGC CATGATCTCG GTTTGAGCGG AGATCAGATT TTGGACAGTT TTATCTTTGC CAATGGGGCT GCGGTGGATT GTGTTTGGGT GGGTGGGGCC AAGCAGGTGG AGGCCGGGCG GCATATTGCT CGGGAGAGGG TTGCTGCGCG GTTTGCCGGT GTTATGCAGG ATTTGATGGC GGCGTTTTGA
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Protein sequence | MTTLHAKQAL LPDGWAKDVR LMLKGRRISA IERGVEAQAG DERHEVLLPT MANLHSHAFQ RGMAGLAELR GPDNDSFWSW RTVMYRFALT MNPEQMQAIA AQLYVEMLEV GFGRVGEFHY LHHDRDGSPY NNRAEMAERI VGAAEETGIG LTLLPVFYAH SGFGGLAPNE GQRRFINDLD GFAKLLEGAK KAASNLPGNV TGIAPHSLRA VTPEELSALQ QLSFDGPIHI HVAEQVKEVD DCVAWSGKRP VAWLLDNADL SSRWCLIHAT HMTDDETMRM AKSGAIAGLC PITEANLGDG TFNAEVFLGQ GGRFGIGSDS NILIGIADEL RQLEYSQRLA HRARNVMAVP GGSTGRYLFD GAVAGGAAAL MAESGLSAGK PADLVSLKSR HDLGLSGDQI LDSFIFANGA AVDCVWVGGA KQVEAGRHIA RERVAARFAG VMQDLMAAF
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