| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5886 |
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| Symbol | gatA |
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| ID | 7380984 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 895787 |
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| End bp | 897166 |
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| Gene Length | 1380 bp |
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| Protein Length | 459 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643649406 |
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| Product | hypothetical protein |
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| Protein accession | YP_002547643 |
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| Protein GI | 222106852 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.371043 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCCAA ACTTTTCAGG CCAAGGCCTT TCAGGCAAAA GCATTGCCCA GCTTGCTGTC
TTGATCCAGT CCGGCGCGCT TGATCCGCAG GATCTGGCCC ATCAGACGTT GGGGGCTATC
AGGGATTACG CGGATCAGAC AATTTTCACC CGGCTAACGC CGGAGCGGGC GATGCAAGAG
GCTCAGGCTT CGGCATTGCG CATCCGGGCC GGTTGTTCGC TTGGCCCTCT GGACGGGATA
CCGATTGCCT GGAAGGATCT CTTTGATCTC AAGGGCGTAA CAACCACCGC TGGCTCCGTG
GTGCTGGACG ATCAGCCACC GGCATCGCGC GATGCGGATG TGGTCGCGGC TCTGGCAAGT
GCTGGAATGG TGTCCATCGG TCAGGTCAAT ATGAGCGAGT TCGCCTTCTC CGGTCTTGGG
GTCAATCCGC ATTACGGCAC ACCGCGCAAT CCGCACGGCG TGGGTGAGGC GCGGGTTCCC
GGCGGCTCGT CCTCAGGCTC GGCTGTAGCG GTGGCTGCCG GGCTGGTGCC GGTGTCGATT
GGTACGGATA CGGGCGGATC TGTCCGCATT CCCTCCGCCT TTAATGGCAT TGTCGGCTAT
AAGGCGACCC GTGGCCGCTA CTCCATGCGT GGTGTCTTCC CCCTGTCAAA AAGTTTGGAT
TCCCTTGGGC CACTCTGCCG CACCGTGCAG GATGCGGTTT GGGTGGATGC TGCGATGCGC
GGGCTGACGC ATCCGCAGGT GACCCGTGCC GCCTTGGCTG GACGCCGTTT CGTCGTACCG
GAAACAGTGT TTTTCGACGG TGCCGAGGAT GGTGTGGTTC AAGCATTTGA GGCTGCGATA
CGCCGTCTGG AACAGGCGGG CGCCGTGGTG CGCCGTCAGG CCTTCCCGAT CATGCAGCAG
ATCCTCGATG CACTCGCCAA GCATGGCCCG CTGGTGACGG CGGAAGCCTA TGTTCTGCAT
CGCCACCGTC TGCATGGACC GGATGCAGCC CGCATGGATC ACCGCGTTGC GACCCGCGCA
CGGCTCGGCG AAAACATCAG CCTTGCCAAC TATGTCGAGC TTGTTGAGCG GCGTGAGCAA
TTGATTTCGG AATTTACCAG CCAGATCGGA GCGGATGAAT TCATCCTGAC ACCAACCGTT
GCGCATGTCG CACCGCTGAC CGCGCGGCTT GTGGCTGACG ATGACCTGTT CGTGGCCATC
AACGGCAAGA CATTGCGCAA CACGATGCTC GGCAATTTTC TCGATTGGTG CGCGGTCTCG
CTGCCGTGCG GCACGGGGGA TGCCAATATG CCGGTTGGTC TGCAAGTGTC CGGGCCTGCA
CGGTCCGATG AGGCCCTGCT TGGTCTGGCG CTTTCGGTGG AAGCGGTGGT TTGCGGCTAA
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| Protein sequence | MTPNFSGQGL SGKSIAQLAV LIQSGALDPQ DLAHQTLGAI RDYADQTIFT RLTPERAMQE
AQASALRIRA GCSLGPLDGI PIAWKDLFDL KGVTTTAGSV VLDDQPPASR DADVVAALAS
AGMVSIGQVN MSEFAFSGLG VNPHYGTPRN PHGVGEARVP GGSSSGSAVA VAAGLVPVSI
GTDTGGSVRI PSAFNGIVGY KATRGRYSMR GVFPLSKSLD SLGPLCRTVQ DAVWVDAAMR
GLTHPQVTRA ALAGRRFVVP ETVFFDGAED GVVQAFEAAI RRLEQAGAVV RRQAFPIMQQ
ILDALAKHGP LVTAEAYVLH RHRLHGPDAA RMDHRVATRA RLGENISLAN YVELVERREQ
LISEFTSQIG ADEFILTPTV AHVAPLTARL VADDDLFVAI NGKTLRNTML GNFLDWCAVS
LPCGTGDANM PVGLQVSGPA RSDEALLGLA LSVEAVVCG
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