| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5806 |
|---|
| Symbol | |
|---|
| ID | 7380594 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Agrobacterium vitis S4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011988 |
|---|
| Strand | + |
|---|
| Start bp | 828146 |
|---|
| End bp | 828514 |
|---|
| Gene Length | 369 bp |
|---|
| Protein Length | 122 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 643649344 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002547581 |
|---|
| Protein GI | 222106790 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3544] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR02953] pentapeptide MXKDX repeat protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTCAAAA CCCTTATTCT CGCCGCAAGC CTGTTGCTTG CCAGCACTGC CGCTTATGCT
GAGGACACTA TGAAAGGCAT GGACCATTCC ATGCCGTCGA ATACGACGTC GAAAGCGCCA
TCCAGCAAGG CTTTTACCGC CGCCAATGCC AGGATGCACA AGGCCATGGT CATGCCGATG
ACCGGCAATG CCGATGTGGA TTTCGTGCGC GGAATGATTG CCCACCATCA GGGCGCTATC
GACATGGCCA AGGTGGAGTT GCAATATGGC AAGGACGAAA AGATCCGCAC GCTGGCCGAA
GAGATCATCA AGGCGCAGCA GGGCGAAATT GCCATGATGC AGCAATGGCT TGAGATGCAC
GGTCAATAA
|
|---|
| Protein sequence | MVKTLILAAS LLLASTAAYA EDTMKGMDHS MPSNTTSKAP SSKAFTAANA RMHKAMVMPM
TGNADVDFVR GMIAHHQGAI DMAKVELQYG KDEKIRTLAE EIIKAQQGEI AMMQQWLEMH
GQ
|
|---|
| |