Gene Avi_5750 details

Gene Information

• Locus tag: Avi_5750
• Symbol: fwdC
• ID: 7381631
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Agrobacterium vitis S4
• Kingdom: Bacteria
• Replicon accession: NC_011988
• Strand: +
• Start bp: 778324
• End bp: 779010
• Gene Length: 687 bp
• Protein Length: 228 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 643649303
• Product: formyl-methanofuran dehydrogenase
• Protein accession: YP_002547540
• Protein GI: 222106749
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0070] Glutamate synthase domain 3

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCAATCT TTGATCTTTC CCAAACCCCG CTGCGCGAAT TGAACAGCGC TTTGCATGCT 
GTGACATCCG GGGCCAATGA CACCAACTTT GAAATTATCA ATCCACGCGG CCATCATGCG 
GTGGCGGTTG GCATTGATAG TCCAGTCACT GTCGAGGTGA AGGGCTCGGT TGGCTATTAT 
TGCGCTGGCA TGAATGATGG CGGCACCGTC ACCGTGCATG GTTCTGCCGG TCCCGGTGTT 
GCTGAAAACA TGATGTCCGG CACGGTGATT ATTGAAGGCG ACGCCAGCCA ATATGCCGGG 
GCCACGGGCC AAGGTGGCCT GCTGGTGATC AAGGGCAATG CGGCCTCGCG TTGCGGCATT 
TCCATGAAGG GTATTGATAT TGTCGTACAG GGCAATATCG GCCACATGTC CGCCTTTATG 
GGTCAATCTG GCCATCTGGT GGTGCTGGGT GATGCGGGTG AAGCGCTTGG CGACTCACTC 
TACGAGGCCA AGCTGTTTGT GCGTGGCACG GTGAAAAGCC TTGGTGCCGA TTGCATCGAA 
AAAGCGATGA AGCCCAAGCA TCTGGAAAAG CTGGCGGAGC TTCTGACGAA AGCAGGCATC 
ACCGATGTGA AGCCGGAAGA ATTCAAGCGT TACGGCTCTG CCCGCAAGCT TTACAATTTC 
AACATTGACA ACGCAGACGC CTATTAA 

 

Protein sequence

MPIFDLSQTP LRELNSALHA VTSGANDTNF EIINPRGHHA VAVGIDSPVT VEVKGSVGYY 
CAGMNDGGTV TVHGSAGPGV AENMMSGTVI IEGDASQYAG ATGQGGLLVI KGNAASRCGI 
SMKGIDIVVQ GNIGHMSAFM GQSGHLVVLG DAGEALGDSL YEAKLFVRGT VKSLGADCIE 
KAMKPKHLEK LAELLTKAGI TDVKPEEFKR YGSARKLYNF NIDNADAY