| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5735 |
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| Symbol | |
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| ID | 7381617 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | - |
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| Start bp | 760929 |
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| End bp | 761864 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643649289 |
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| Product | transcriptional regulator AraC family |
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| Protein accession | YP_002547526 |
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| Protein GI | 222106735 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.582182 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTCGAC GTCCTCCCTT GATCAACAGA CTTGGTGCAA CACCTGTACA CCCCGAGCGC
GATCCCGCCC ATCCCCTGGT TGTATTTGGC GATAACCGCT TCTGCGCCGG AGAATTGCTG
GATGTCCAGA AGATGGCTGG GCCGCATATG CACAGCCAAA TCGAGCTGAA TTTCGTGCTG
GAAGGCTCAA TGACCTATTG GTTCGATGGC CGGGAGCTGA CGATTTCGGA AGGCCGGCTC
TGCCTGTTCT GGGGGATGAT CCCCCATCAG GTGATCGACC GGCGGGAAGG CACCCGCTTT
ATCTGTCTTT ATGTGCCGAT GTCGGTGTTT CTGGGATTGG CCAGCCTCAG CCAGTTTCGC
GACTCGGTGT TTCGCGGCGC CGTCATCGAG GCTTTGCACC TGCGGGCCTG GGACCGTGAA
ATCTTTCTGC GCTGGCGTGA CGAATTGCTG GGTGGCGATG AAGGCGATAT CGAGATCGTC
CGCAGCGAAC TGACCGCCCG CCTGATGCGG ATCGAACGGG ACGGCTGGCG TGACCTGCGC
GAACAGGGAT CGGCGCTGGC AAGCCTCGGT CAACGCGATG CGGGCTGGAT GCTGCATGTG
GAAAAAATGC TGCGCTTCAT CGGCGAGCAC GCACCTGACA CGATTTCTGC CGAGGATGTT
GGCCGCGCCG CCGGTCTGCA TCCCAATTAT GCCATGAGCC TGTTCAAGCG TGCGGTGGGC
ACCACCATCA ACCAGGCGAT CATCCGCCAC CGGCTGGACA CCGCCCAATC CCTGCTGATT
TCCTCCGATA TGCCGATTAC TGAAGTGGCC TACGAGTCAG GCTTTGGCTC GCTCTCGACC
TTTTACGAGG CCTTCCAGCG TCGGTTCATG GAAAAACCGG TCCAATATCG CCGCCGGATG
CGAGCGAAAG GCACCGCGGC ACAGTCAATC GCATAA
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| Protein sequence | MTRRPPLINR LGATPVHPER DPAHPLVVFG DNRFCAGELL DVQKMAGPHM HSQIELNFVL
EGSMTYWFDG RELTISEGRL CLFWGMIPHQ VIDRREGTRF ICLYVPMSVF LGLASLSQFR
DSVFRGAVIE ALHLRAWDRE IFLRWRDELL GGDEGDIEIV RSELTARLMR IERDGWRDLR
EQGSALASLG QRDAGWMLHV EKMLRFIGEH APDTISAEDV GRAAGLHPNY AMSLFKRAVG
TTINQAIIRH RLDTAQSLLI SSDMPITEVA YESGFGSLST FYEAFQRRFM EKPVQYRRRM
RAKGTAAQSI A
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