Gene Avi_5683 details

Gene Information

• Locus tag: Avi_5683
• Symbol: accC
• ID: 7381573
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Agrobacterium vitis S4
• Kingdom: Bacteria
• Replicon accession: NC_011988
• Strand: +
• Start bp: 706845
• End bp: 708845
• Gene Length: 2001 bp
• Protein Length: 666 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 643649245
• Product: acetyl-CoA carboxylase biotin carboxylase
• Protein accession: YP_002547482
• Protein GI: 222106691
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit
• TIGRFAM ID: [TIGR00514] acetyl-CoA carboxylase, biotin carboxylase subunit

Plasmid Coverage information

• Num covering plasmid clones: 4
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCAATTT CCAAAATCCT GATCGCCAAC CGTGGCGAAA TCGCCTGCCG GGTGATCAAG 
ACCGCCAAGC GGATGGGCAT TGCCACGGTC GCTGTGTATT CCGATGCCGA TGCCAATGCG 
CTGCATGTCA AGCTGGCGGA TGAGGCGGTG CATATCGGCC CGTCGCCCTC CAACCAATCC 
TATATCGTTA TCGACAAGAT CCTCGAGGCG ATCAGGCAGA CCGGTGCGGA TGCCGTGCAT 
CCGGGCTATG GGTTTCTGTC GGAAAATGCC GCCTTTGCCG AGGCGCTGGA CAAGGCGGGC 
GTCGCCTTCA TTGGCCCGCC GGTTGGCGCC ATCAAGGCCA TGGGCGACAA GATCACCTCC 
AAGAAGCTGG CGGCAGAGGC GGGGGTGTCC ACTGTGCCCG GCCATATGGG GCTGATTGCC 
GATGCCGATG AAGCGGTGAA AATCGCTGCT CAGATCGGCT ATCCCGTGAT GATCAAGGCG 
TCTGCCGGTG GCGGTGGCAA GGGCATGCGC ATCGCCTGGA ACGATGCCGA GGCGCGCGAG 
GGTTTCCAAT CGTCGAAGAA CGAGGCGATG AACTCGTTTG GCGACGACCG GATCTTTATC 
GAGAAATTCG TTGACCAACC GCGCCATATC GAAATCCAGG TGCTGGGCGA TAAGCATGGC 
AACGTGCTCT ATCTCGGCGA GCGCGAATGC TCGATCCAGC GGCGAAACCA GAAGGTGATC 
GAGGAAGCGC CATCGCCGTT TCTGGATGCG GACACCCGCA AGGCGATGGG CGAACAGGCC 
GTGGCGCTGG CCAAGGCGGT TGGATATTAT TCCGCCGGCA CGGTGGAGTT TATCGTCGAT 
GGCAATCGCA ATTTCTACTT CCTGGAAATG AACACGCGCT TGCAGGTCGA GCATCCGGTA 
ACAGAACTGA TCACCGGGCT TGATCTGGTT GAGCAGATGA TCCGGGTGGC ATCGGGCGAA 
ACGCTGGCCC TTGCGCAAGG AGATGTGACG TTGACGGGCT GGGCAGTCGA AAGCCGGCTC 
TATGCCGAAG ACCCCTATCG CAATTTTCTG CCGTCGATCG GCAGGCTGTC ACGCTACCGC 
CCGCCCAGCG AAGGCCAGCA AGCCGATGGC ACGGTGGTCC GCAACGATAC CGGGGTGTTC 
GAAGGCGGGG AAATCTCGAT GTATTACGAT CCGATGGTTG CCAAGCTCTG TACATGGGGC 
CCTGACCGGA TCACCGCCAT CGATGCGATG AGTGCGGCGC TGGACCGGTT TGAAGTCGAG 
GGCATTGGCC ATAACCTGCC GTTTCTGTCG GCGGTCATGC AGCATCCGCG CTTTCGCTCC 
GGCAAGATCA CCACCGCCTT TATCGCCGAG GAGTTTCCAG AGGGCTTTTC CGGGGTCGAG 
CCGGATGAGA TGGCGGGTAA GACGCTTGCC GCCATTGCCG CTCTTGTCCA CCAGCGGCGC 
GAGGCCCGTG CCGCGCAGGT CTCCGGCACC ATGGGCAATC ACGCCCGCAC CATTGGCCGT 
GACTGGGTCG TGGGGCTGGC AGAGCAGAAT TATCCGCTGA CGCTTTCCAC TGATCCCGGC 
AGCATGATGT TTGCCGATGG CAATGTGCTC TCGGTCGATG GCGTGTGGCA GCCGGGCCAG 
ACGCTGGCAA TTTTTACCGT CAATGGCCAA AGCATCGGGC TTAAAATTGA CCTCAAGGGA 
CCTGCTATCC GCCTGCGCTG GCGGGGCATG GATGTCGTGG CGCATGTTCG CAATCCGCGC 
GTCGCCGAGC TTGCCCGGCT TATGCCCCGG AAATTACCGC CCGACACGTC AAAAATGCTG 
CTCTGCCCGA TGCCGGGTGT GGTGACAGGC ATTGCGGTTG CCGAAGGCGA CGCCGTGGAG 
GCCGGTCAGG CGCTGGCGAC GGTCGAGGCG ATGAAGATGG AAAACATCCT CAAGGCCGAG 
CGACGCGGCG TGGTGAAGAG GCTTGTTGCC AAGGCTGGCC AAAGCCTGGC GGTGGACGAA 
CTGATCATGG AATTCGAGTG A 

 

Protein sequence

MAISKILIAN RGEIACRVIK TAKRMGIATV AVYSDADANA LHVKLADEAV HIGPSPSNQS 
YIVIDKILEA IRQTGADAVH PGYGFLSENA AFAEALDKAG VAFIGPPVGA IKAMGDKITS 
KKLAAEAGVS TVPGHMGLIA DADEAVKIAA QIGYPVMIKA SAGGGGKGMR IAWNDAEARE 
GFQSSKNEAM NSFGDDRIFI EKFVDQPRHI EIQVLGDKHG NVLYLGEREC SIQRRNQKVI 
EEAPSPFLDA DTRKAMGEQA VALAKAVGYY SAGTVEFIVD GNRNFYFLEM NTRLQVEHPV 
TELITGLDLV EQMIRVASGE TLALAQGDVT LTGWAVESRL YAEDPYRNFL PSIGRLSRYR 
PPSEGQQADG TVVRNDTGVF EGGEISMYYD PMVAKLCTWG PDRITAIDAM SAALDRFEVE 
GIGHNLPFLS AVMQHPRFRS GKITTAFIAE EFPEGFSGVE PDEMAGKTLA AIAALVHQRR 
EARAAQVSGT MGNHARTIGR DWVVGLAEQN YPLTLSTDPG SMMFADGNVL SVDGVWQPGQ 
TLAIFTVNGQ SIGLKIDLKG PAIRLRWRGM DVVAHVRNPR VAELARLMPR KLPPDTSKML 
LCPMPGVVTG IAVAEGDAVE AGQALATVEA MKMENILKAE RRGVVKRLVA KAGQSLAVDE 
LIMEFE