| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5667 |
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| Symbol | hadL |
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| ID | 7381136 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | - |
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| Start bp | 689895 |
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| End bp | 690614 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643649230 |
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| Product | 2-haloalkanoic acid dehalogenase |
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| Protein accession | YP_002547467 |
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| Protein GI | 222106676 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01428] 2-haloalkanoic acid dehalogenase, type II
[TIGR01493] Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGGCAA AGGCCTTTGC GGATTTCAAA TATCTCACCT TCGACGTGGT CGGCACGCTC
ATTGATTTTG AGAGCGGCAT TACCGATTGC CTCGCTGAGA TTGCCGCAGA GACAGGTGTG
ACGATGGATG GAGAACAAGC TCTTTCGCTC TATCGTGCGG CCCGCTATGA CGATGAAGCC
TTGCTTTTTC CCGACGATCT CGCGCGGGTC TACCTAAAGA TCGCCCCCGC CCTCGGCCTG
CCGGCAGACG CTGCCTTTGG CGAGCGTCTG CGTAGCTCCG TCACCGATTG GAAGCCCTTT
GCCGATAGCG TTGCTGCGCT GGCGAAGTTG AAAACCCGCT ACCGGCTGAT TGCCATGACC
AATGCGCAAC GCTGGGCCTT TGCGTATTTC GATGAAGCCT TGGGCGAGCC CTTTCATGCC
GCCTTCACCA CCGACGACAC AGCGACGGAA AAGCCTGATC CGGCGTTTTT CGAAACTGTT
TTCGCTTTCG TTGAAAAGGA AGGCAATAGC CGCGCCGATA TCCTGCATGT GGCACAAAGC
CAGTATCACG ACATCGGCAT TTCACGGCAG CTCGGCTTAA CCAATTGCTG GATCGAGCGA
CGCCATGCCC AAAAAGGCTA TGGCGGCACG ATCGAGCCGG AAACATTTGT GAAACCCGAT
TTTCACTTCA CCTCCATGGC GGGACTTACC GAGGCTGTAG AGTTGGATCG CGCCGCCTGA
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| Protein sequence | MMAKAFADFK YLTFDVVGTL IDFESGITDC LAEIAAETGV TMDGEQALSL YRAARYDDEA
LLFPDDLARV YLKIAPALGL PADAAFGERL RSSVTDWKPF ADSVAALAKL KTRYRLIAMT
NAQRWAFAYF DEALGEPFHA AFTTDDTATE KPDPAFFETV FAFVEKEGNS RADILHVAQS
QYHDIGISRQ LGLTNCWIER RHAQKGYGGT IEPETFVKPD FHFTSMAGLT EAVELDRAA
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