| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5501 |
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| Symbol | |
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| ID | 7381418 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 496749 |
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| End bp | 497819 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643649090 |
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| Product | two component sensor kinase |
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| Protein accession | YP_002547327 |
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| Protein GI | 222106536 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.927814 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACACA TTCTGTTTTC CCAGCACCAG AACCGGCCAA AGCTGAGGGC GGTGTTCATC
CTGTTCCTGC TGGTCTGCAT CTTTGCTGCC GATACGATCA CCAATTTCGA GATCGCTTTT
GCGGTCTTCT ATATCGCGGT CATTCTGATC GCCATCGGCT TCCTGTCGAT GCGCGGGGTC
GTCGCACTGG CAATGATCTG CATTGGCCTG ACGGTACTGA GCTTGTTTCT CACCCGGCGC
GGATCGTTCG AATCCGGGCT CATGAATTGC GGCATCAGCA CCTGCGCCAT TGGGGTGACG
ACCTATCTTG CCTTGAAAAT CGTTGCCGCC CAGGCGGCTA TTTACGATGC GCAGGCGCAG
TTTTCCCGCA TGGCGCGGCT GACGCGGCTG GGTGAATTGA CCGCCTCCAT CGCCCATGAG
GTCAATCAGC CGCTGGCTGC CGTCGCCACC AGCGCCGATG CCTGTCGCCG CTGGCTTGAT
CATACGCCGC CCAATCTGGA TCGTGCCCGT CAGGCGGCGG AGCGAATTGC CAGCGACGTG
AAACGCGCCA GCGATGTGAT TGTGCGAGTG CGCAGACTGG CCAGAAGCGA ACCGCCGCAA
CGGGAAAGCT TCGACCTCAA TGCGGCAACG ACCGAAGCCA TCGGCCTGGC CGAACATGAA
CTTGAGCGCA ACAACATTGC GCTGGAGATG GCCCTTGCGG AAGACCTGCC GCCGGTGCTG
GCTGATCGTA TTCAGATCCA GCAGGTGATC GGCAATCTCC TGCTCAATGC CATCGAAGCC
ATGGCGGCTG TTCCCAGTTT CAAGCGGGAG CTTTTGATCT CGACCTTTGT CGATGGCGAT
GACAGGATCG TGCTTGCCGT CGCCGATTCA GGTCCCGGTA TGAAGCAATC GACGCTGGAT
CATCTGTTCG AAGCGTTCTG GACCACCAAG GAAAGCGGCA TGGGCATCGG GCTCGCCATC
AGCCGCTCGA TCATCGAGGC GCATGGGGGG CGTATTTCCG TGACGTCGGC GCATCGCATG
GGGACGGTCG TGCAATTCAG TCTGCCCTTA AGCGAAGAGA GTAAGGCATG A
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| Protein sequence | MKHILFSQHQ NRPKLRAVFI LFLLVCIFAA DTITNFEIAF AVFYIAVILI AIGFLSMRGV
VALAMICIGL TVLSLFLTRR GSFESGLMNC GISTCAIGVT TYLALKIVAA QAAIYDAQAQ
FSRMARLTRL GELTASIAHE VNQPLAAVAT SADACRRWLD HTPPNLDRAR QAAERIASDV
KRASDVIVRV RRLARSEPPQ RESFDLNAAT TEAIGLAEHE LERNNIALEM ALAEDLPPVL
ADRIQIQQVI GNLLLNAIEA MAAVPSFKRE LLISTFVDGD DRIVLAVADS GPGMKQSTLD
HLFEAFWTTK ESGMGIGLAI SRSIIEAHGG RISVTSAHRM GTVVQFSLPL SEESKA
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