Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_5466 |
Symbol | |
ID | 7381557 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011988 |
Strand | + |
Start bp | 466285 |
End bp | 467784 |
Gene Length | 1500 bp |
Protein Length | 499 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 643649064 |
Product | hypothetical protein |
Protein accession | YP_002547301 |
Protein GI | 222106510 |
COG category | [S] Function unknown |
COG ID | [COG4529] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.1846 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTCCAGT TTATTTCAGG GGTTTCTCAC TTGGGAGCTT ACCAAGCGAA AAGCAGCATT TCGCCTGCCC GCAAGACAGT CGTTATTGTC GGTGGAGGGT TTGCCGGCGC GTCAGTAGCG CGGTTTCTGG CGGAGCGGCA GGACGAGGAT CTGCAAATTC TGGTATTTGA GCCGAGAGCC ACGCTGGGGG CCGGTCTTGC CTATGATACG GACGATCCGG CACTTCGTCT CAATGTTGAA GCAAGCCGGA TGATAGCCGA TGCTAGGGAG CCACTCGCCT TTGCCGAGTG GTTACGGCAA TCTGGCGCGC TTGCGGACGA TCCTGACGCG CAGGTCGAAT GCACAGGCAG TGATGTCCCG CAGGTGTTTG CCCGCCGTGA AGCCTTCGGT CGTTTCATGG CGGAGCGGAT GGCGCCTTAT CTTGAAGAGG GTAGGATTCA GCACATCCGG GAGACGGTGG AAAGCGTGAC CCGGATCGGG AGCCGCTGGT TGGTGACCGG CAATTTGGGT GCCTGGATCG AGGCCGATAT CGTCGTCATG GCAGCCACCC ACCCGGCTCC CAAGGCGCCG CGGGCATTGC AATCAGCCCT GCAAGGCCAT CCACGCTTCC TTACCAATCC CGTCGCGGGC CCGAGCCTTT GCGGTTTCCG TGCGACGGAT CGGGTTCTTG TCGTGGGCAT GGGTCTGACG GCAGCGGATA TTGTCGCCAG TTTGAGTGTC CGTGGCCATC GCGGCGAGAT CACCGCCTTT TCAAGGCGCG GCATGTCGTC TCGCGGCCAT ACTCTTCAGC CCCAGGACTG GTCTTGCTCG TTTAGCGAGG ATGATTGTCG CTCGGTAAGG TCGTTGTTAC GAGCCGTGCG GCGTGCGGTG GCCGATGCGC AGGCCCATGG CGTGACTTGG CATGCGGTGA CCGACGCCCT GCGTAAACAG GGTCAGACCA TTTGGGCGCG GCTCAATGCG ACGGAAAGAA AACGGCTGTT GCGCCACGCC CGCCGTCTTT GGGACGTGCA TCGCTACCGG CTGCCACCCC AGGCACAAGC CATTTGGCAG CAGCGGTTGG CTGAAGGCAG TCTGACGCTC GCCTCAGGCC GGATGATTAA GATCGAGCGG GGTATCGAGA CCATCGCTAT TGATCTCGTG GTGGCCTCGA CCGGGTTGGT GGAGCGGAAA TTGTTCGACT GGGTGGTGCT GGCGACAGGT CCCGATCATG CCAGTGTTCT AAAATCACAG TCGATGTTGT TGACGCTGGA AAGCACGGGC CACCTCCAGG CCGATGCCTA CGGGCTCGGT ATTGCCTGTG ATGAGACTGG TCAGGCCATT GGTATTGATG GGCGACCGCA AGCGGATTTG TTTATTGCAG GCCCGCTGGC ACGCGGTACG TTTGGTGAGC TTATGGGCGT CCCGGAAGTC TCCCGCCAGG CCGAACTGGT GGCAGATCGT ATCGCCAATG CCGTCTTGGC TAGCCGCAGC ATGGCGAGCC ATAGCATCGA AGCGCGATAG
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Protein sequence | MLQFISGVSH LGAYQAKSSI SPARKTVVIV GGGFAGASVA RFLAERQDED LQILVFEPRA TLGAGLAYDT DDPALRLNVE ASRMIADARE PLAFAEWLRQ SGALADDPDA QVECTGSDVP QVFARREAFG RFMAERMAPY LEEGRIQHIR ETVESVTRIG SRWLVTGNLG AWIEADIVVM AATHPAPKAP RALQSALQGH PRFLTNPVAG PSLCGFRATD RVLVVGMGLT AADIVASLSV RGHRGEITAF SRRGMSSRGH TLQPQDWSCS FSEDDCRSVR SLLRAVRRAV ADAQAHGVTW HAVTDALRKQ GQTIWARLNA TERKRLLRHA RRLWDVHRYR LPPQAQAIWQ QRLAEGSLTL ASGRMIKIER GIETIAIDLV VASTGLVERK LFDWVVLATG PDHASVLKSQ SMLLTLESTG HLQADAYGLG IACDETGQAI GIDGRPQADL FIAGPLARGT FGELMGVPEV SRQAELVADR IANAVLASRS MASHSIEAR
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