| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5410 |
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| Symbol | |
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| ID | 7381510 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 408372 |
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| End bp | 409754 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 643649018 |
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| Product | cytosine deaminase-like protein |
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| Protein accession | YP_002547255 |
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| Protein GI | 222106464 |
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| COG category | [F] Nucleotide transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0402] Cytosine deaminase and related metal-dependent hydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0215382 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTGACA GTTCCGTCCG CACGCTGGCA CGTACCAGCT TTACCGGCCA TGGCCGCATT
GTTATCCGTC AGGCCCGCGT GCCAACGGTC TGTCTTGCGG ACGGTGTGCC GCCGGACAGC
GCTCTCGACC GCGACGGCTG TGCTCTGGTG GATATCCTGC TGGACGACGG ACGTGTTGCA
GCCGTGCTGC CAGCGGCAAG CGGGGTGACC GGCGGTGGCA TCGATCTGGA AGGCCGCCAT
CTCTGGCCGT TGATGATCGA CATGCATGTC CATCTCGACA AGGGCCATAC GATCAGCCGG
GCACCAGCCT CCGATGGCAC GCATCCCAGC GCTCGTGCGG CGACGACAGC TGACCGGCAG
GCCCATTGGC GTCACGACGA TCTGGTCCGG CGGATGGAAT TCGGTCTTGC CTGCGCGGAT
GCGCACGGCG TTGCCGCGCT CCGCACCCAT CTCGATAGCC ATGCGGGGCA GGCGGAAACC
ACCTGGGCGG CATTTGATGA GGTGCAGGCC CGTTGGTCGG GGCGCATTGC GTTGCAGGCG
GTCGGCCTCG TGCCGCTGGA TGCCTATCGC ACCGACCATG GGAAGCAGCT TGCCGACCTG
ATCGCGCGTC AGGGCGGGCT ATTGGGCGGG GTAACGCGCG CCTCGGGTGG CACTCATGGT
ATCGGGAAAA ATGGCACCGG GCTTGATGAT ATCGATGCCT TGCTCGACAG CCTTTTTCTG
CTGGCCCGCG AGCGTGATCT CGATATCGAC CTGCATGTGG ATGAAGCTGA AAAGGCCGAT
GCCTTGCCGC ATGTGGCCCG CGCTGCCATC CGCCACGGCT ATGAGGGTCG CGTTACCTGC
GGCCATTGCT GTTCGCTGGC TTTGTTCAGC GAGACGGAAA TCCGCGAGCG GATCGCGCTT
CTGGCCGATG CCGGACTGTC TATCGTCACG CTTCCGACCG TCAATATGTA TTTGCAGGGC
CGGGCGCAGG GTATAACCCC GCGTTGGCGT GGTGTTACGC CTGTCAAGGA GCTGCGCGCC
GCCGGTATCC GCGTCGCGGT TGCTGGTGAC AATTGCCGCG ATCCGTTTTT TGCCTATGGC
GATCATGATA TGGTCGATAC CTGGCGCCAA TCGGTGCGCA TTCTGCATCT CGACCATCCC
TATGACGATG CCGTGGCACT GGCGACCACC CAACCCGCCG CGATGACCGG TTTTTCCACT
GGAACCATCG GGGCCGGGCG TCCGGCGGAT CTGATGATCT TTGAGGCCTG GAGCATGGAC
CAGGTCATTG CCCGCCCGCA AACCGACCGG GTGATCGTGC GGGCAGGCAG GGTCAGTGAG
GCAGTGTTGC CATCCTATCG GGAGATCGAA TTGCCCTTTC TCACCCCATC ACCCTCATCC
TGA
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| Protein sequence | MIDSSVRTLA RTSFTGHGRI VIRQARVPTV CLADGVPPDS ALDRDGCALV DILLDDGRVA
AVLPAASGVT GGGIDLEGRH LWPLMIDMHV HLDKGHTISR APASDGTHPS ARAATTADRQ
AHWRHDDLVR RMEFGLACAD AHGVAALRTH LDSHAGQAET TWAAFDEVQA RWSGRIALQA
VGLVPLDAYR TDHGKQLADL IARQGGLLGG VTRASGGTHG IGKNGTGLDD IDALLDSLFL
LARERDLDID LHVDEAEKAD ALPHVARAAI RHGYEGRVTC GHCCSLALFS ETEIRERIAL
LADAGLSIVT LPTVNMYLQG RAQGITPRWR GVTPVKELRA AGIRVAVAGD NCRDPFFAYG
DHDMVDTWRQ SVRILHLDHP YDDAVALATT QPAAMTGFST GTIGAGRPAD LMIFEAWSMD
QVIARPQTDR VIVRAGRVSE AVLPSYREIE LPFLTPSPSS
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