Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_5401 |
Symbol | |
ID | 7381504 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011988 |
Strand | + |
Start bp | 402081 |
End bp | 403181 |
Gene Length | 1101 bp |
Protein Length | 366 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 643649012 |
Product | ABC transporter nucleotide binding/ATPase protein |
Protein accession | YP_002547249 |
Protein GI | 222106458 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3839] ABC-type sugar transport systems, ATPase components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.459496 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCATCC AGATCGAATT GAACGGCGTC AACAAGCATT ACGGCGCTTT CCATGCCCTG AAGAATATCA ATCTCGCCAT CGAAAAGGGC AGTTTCGTCG CCCTGGTTGG CCCATCCGGC TGCGGCAAGT CCACACTGTT GCGGTCGCTG GCCGGGTTGG AGAAGATTTC CGCTGGCGAA ATGAAGATCG CTGGCAACTT GATGACCAAT GTGCCGCCCC GCAAGCGCGA CATTGCCATG GTGTTCCAGT CCTACGCGCT CTATCCGCAT ATGACGGTTG AGGAAAATCT GACCTATAGC CTGCGGATAA AGGGTATAGG CAAGGCGGAG GCGCGCCAGG CCGCCGAGGC AGTGGCGACA ACAACTGGCC TGATGCCGCT GTTGAAACGC TATCCGCGTG AATTGTCCGG CGGTCAGCGC CAGCGCGTTG CCATGAGCAG GGCGATCATC CGCAATCCCA AGGCCTTCCT GTTCGACGAG CCGCTGTCCA ATCTCGATGC CTCCCTGCGG GTGCATATGC GAAAAGAGAT CCGGCTGCTG CATGACCGGT TGAAGGCGAC CTCTGTCTAT GTCACCCACG ACCAAGTCGA GGCGATGACC ATGGCCGATC ATGTCGTGGT GATGCGCGAT GGCGTCATAG AGCAGCAGGG CCGACCTCTG GACCTTTACG ACCGGCCTGC AAACCGTTTC GTTGCCGGTT TTATCGGCTC TCCGGCGATG AATTTCATTC CTGCGCGGGT CTCGCCGGAT GGGCTTGGTC TGGAACTTGA TTTTGTCGGG AAGGCGGAGA TTCTGAGATT TGCCGCCGGA ATGACTGATG GCCTTGCGGC AGGCCAGCCA CTAACCCTTG GCCTGAGGCC GGAACACCTG TCGCTGACGG CTCCCGGCGA AGGCGCGTTC GACGTCGAGG TGGCGCTGGT CGAATCGACG GGATCGTCAA CCTATGTGAC GACCAGAACC GAGCCGGAAT TGACCATTGT CGTTTCGGGC GGTCGCGGCC TTCGCTCCGG CGACCGGCTG GGTGTCCGGA TCGATCCGCA GACCGTGCAT CTTTATGATG CGCAGACCGG TTTGCGGCTG GATTTCGAGG GGATGCAATA A
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Protein sequence | MTIQIELNGV NKHYGAFHAL KNINLAIEKG SFVALVGPSG CGKSTLLRSL AGLEKISAGE MKIAGNLMTN VPPRKRDIAM VFQSYALYPH MTVEENLTYS LRIKGIGKAE ARQAAEAVAT TTGLMPLLKR YPRELSGGQR QRVAMSRAII RNPKAFLFDE PLSNLDASLR VHMRKEIRLL HDRLKATSVY VTHDQVEAMT MADHVVVMRD GVIEQQGRPL DLYDRPANRF VAGFIGSPAM NFIPARVSPD GLGLELDFVG KAEILRFAAG MTDGLAAGQP LTLGLRPEHL SLTAPGEGAF DVEVALVEST GSSTYVTTRT EPELTIVVSG GRGLRSGDRL GVRIDPQTVH LYDAQTGLRL DFEGMQ
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