| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5357 |
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| Symbol | dppA |
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| ID | 7380712 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 356002 |
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| End bp | 357510 |
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| Gene Length | 1509 bp |
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| Protein Length | 502 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643648973 |
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| Product | ABC transporter substrate binding protein (dipeptide) |
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| Protein accession | YP_002547210 |
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| Protein GI | 222106419 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0991682 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACTGA ACAGAGTTTT GACCGCGCTG CTCGTCACCG CCGCTTTTGC CGCACCTGTG
ATGGCCGCTG ACCTGAAGAT CGGCTTGTCG GAAGACCCTG ACGTGCTCGA TCCGGCGCAG
TCGCGCACGT TCGTGGGGCG TATTGTCTAT ACGGCCATGT GCGACAAACT GGTTGATGTC
TCGCCCGACT TGAAAATCAT CCCGCAGCTT GCCACCGGCT GGGCCTGGAG CGAGGGTGGC
AAGGTTTTAA CCATGACGCT GCGCCAGGGC GTGAAATTTC ACGACGAAAC ACCCCTCAAC
GCCGAAGCTG TTGTCGCCAC CATCCAGCGC AACATGACCA TGCCGGAATC GCGCCGCAAG
AGCGAGCTTG CCTCGGTTGA AAAGGTCGAG GCTATCGGCA GCGATACGGT GAAATTTACC
CTCAAGGCCC CGGATTCGAC CCTGCTGGCG CAATTGTCCG ACCGGGCCGG GATGATCGTC
TCGCCCAAGG CCGCCAAGGA ATTGGGCGCT AATTTCGGCA GCCATCCCGT CTGCGCCGGT
CCATTCAAAT TCGTCGAGCG GGTGCAGCAG GACCGGATCG TGCTGGAGAA ATTTGCCGAT
TACTGGAACA AGGATCAGAT CTTCATCAAC AAGCTCACCT ATCTGCCGAT TGTCGATAGC
ACGGTGCGCC TCGCCAATTT GCGCTCCGGT GATCTCGATA TGATTGAGCG GGTGGCGCCG
ACCGATGCCG CCTCCATCAA ATCCGATGGC AAGCTGGACT TTGAACAGGC AGTGGGCGTT
GGTTACATGG CGATGTATGT TAATATCGGC AATGGTCCTC GCGCCAATAA CCCGCTTGGC
AAGGACAAGC GCCTGCGGCA GGCCTTCTCG CTGGCCATCG ATCGCGAAGC ACTGAATCAG
ATCGTCTTTG AGGGGACGGC TCTGGCGGGC AATCAGCCAT TTCCGCCTGT GAGCCCCTGG
TATGACAAGC GGATTCCCGT TCCTGCCCGC GATGTCGAAA AGGCAAAAGC CCTGGTCAAA
GCCGCTGGAT TTGACCGGGT GCCGATTGAG TTGCAGGTGT CCAACAGCGC GACGATGTTG
CAGATGATGC AGGTCGTGCA ATCGATGGTC GCTGAGGCTG GTTTTGACGT GACGCTGAAG
ACGATGGAAT TTGCCACCAT GCTCAACGAG CAGACGACTG GAAATTACCA AATCAGCCGT
TCGGATTGGT CCGGGCGTGT GGACCCGGAT GGCAATCTGC ATCAGTTCGT CACCTGCAAG
GGTGGCATCA ACGATACCAA ATATTGCAAT CCCGCCGTCG ATACGCTGTT GAACGAAGCG
CGGCAATCCA CCGACGACGC CGTGCGCAAG CAGAAATATG ATGCGGCCGA TGAAATCCTG
AATGACGACC TGCCGATCAT CTATCTCGGT CATCAGTCCT GGCTCTGGGC GTCGAGCAAG
AAGATCACCG GTTTTGTGCC GTCACCGGAT GGAATGATCC GGCTGACGGG CATGCAAAAG
GCCAATTGA
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| Protein sequence | MKLNRVLTAL LVTAAFAAPV MAADLKIGLS EDPDVLDPAQ SRTFVGRIVY TAMCDKLVDV
SPDLKIIPQL ATGWAWSEGG KVLTMTLRQG VKFHDETPLN AEAVVATIQR NMTMPESRRK
SELASVEKVE AIGSDTVKFT LKAPDSTLLA QLSDRAGMIV SPKAAKELGA NFGSHPVCAG
PFKFVERVQQ DRIVLEKFAD YWNKDQIFIN KLTYLPIVDS TVRLANLRSG DLDMIERVAP
TDAASIKSDG KLDFEQAVGV GYMAMYVNIG NGPRANNPLG KDKRLRQAFS LAIDREALNQ
IVFEGTALAG NQPFPPVSPW YDKRIPVPAR DVEKAKALVK AAGFDRVPIE LQVSNSATML
QMMQVVQSMV AEAGFDVTLK TMEFATMLNE QTTGNYQISR SDWSGRVDPD GNLHQFVTCK
GGINDTKYCN PAVDTLLNEA RQSTDDAVRK QKYDAADEIL NDDLPIIYLG HQSWLWASSK
KITGFVPSPD GMIRLTGMQK AN
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