| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5286 |
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| Symbol | |
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| ID | 7380654 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | - |
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| Start bp | 286789 |
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| End bp | 287790 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643648916 |
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| Product | transcriptional regulator LysR family |
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| Protein accession | YP_002547153 |
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| Protein GI | 222106362 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.155705 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGGAGC AGGCCTATGC AAATCTTGAT ATCCGTCTGA TGCGCACTCT GCGCTTGCTG
TTGACGGAAT GCAGCGTATC GCGCACTGCC GATCTGCTGG GCCAGGCGCA GCCGACCGTC
AGCCTTTCGC TGAAGCGGCT ACGCGATATT TTCCAGGATC CGCTGCTGGT GCGGTCCGGC
AGCGCGCTTG TGCCAACCGA GCGAGGGCTA GCGCTGCGCT CGGCGATGAA TGATATTCTC
GGTCGGATCG ATACCCACCT GATCTCTCCG ACTGCTTTTG ATCCCGCCGT ATCCGTTCGA
CATTTTCGCA TTGTTGCCAG CAATTGTCTC GGCACCGTGT TCATGCCGCA ATTGATCGGC
GCGATCACCG ATATGGCCCC CGGTATTTCC ATCGACGCCT CGCCAATGCC ATCCCAGGAT
GACCTGCTGT CGGGACTATC GGAGGGCCGG ATCGATGCGG TGATCGGCAA TTGGCCCCAC
CCGCCGGAAC ACCTGCGCAT CGCGCCAATG CTGAAGACCG ATATCGTCTG CATGGTCAGA
TCCACGCACC GTTTTGCCCG CCGGGGCCGG GATCGCATCC GGCTTGATGA ATATCTTGAG
GAAAGCCATC TGTCACCGAC GTCAGAGCGT GACGCGCAAT TCAGCCCCAT TGACGGACGA
TTGCGTGATC TCGGCGTCAA GCGGCATATC CGCGCCACGG TGCCGGAATA TTCCATCGCG
CCCTACGTCC TTGCCCGCTC TGACCTCGTC TTCACCACCG GACGGCACTT TGCCGAACAG
GTGGCGCAAA CCTTCCCCTT TGCGGTTCTG GACGCTCCGG TGGAATTGGG GCAGATGCAT
TTCTATACGC TCTGGCACGA CCGCAAACAT CACGCGCCAG ACCAGGCGTG GCTACGCCGG
ATGATCAAAC ACGCCTCAGC CGAGATGCAA ACACTCGACC GCCCCGGTCC CTTGCCTCTT
CCACCGATGC ACCACATGCA GCCCAGTTGG CAGCCAAGCT GA
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| Protein sequence | MSEQAYANLD IRLMRTLRLL LTECSVSRTA DLLGQAQPTV SLSLKRLRDI FQDPLLVRSG
SALVPTERGL ALRSAMNDIL GRIDTHLISP TAFDPAVSVR HFRIVASNCL GTVFMPQLIG
AITDMAPGIS IDASPMPSQD DLLSGLSEGR IDAVIGNWPH PPEHLRIAPM LKTDIVCMVR
STHRFARRGR DRIRLDEYLE ESHLSPTSER DAQFSPIDGR LRDLGVKRHI RATVPEYSIA
PYVLARSDLV FTTGRHFAEQ VAQTFPFAVL DAPVELGQMH FYTLWHDRKH HAPDQAWLRR
MIKHASAEMQ TLDRPGPLPL PPMHHMQPSW QPS
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