Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_5273 |
Symbol | |
ID | 7381393 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011988 |
Strand | + |
Start bp | 274571 |
End bp | 275620 |
Gene Length | 1050 bp |
Protein Length | 349 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 643648905 |
Product | ABC transporter membrane spanning protein (sugar) |
Protein accession | YP_002547142 |
Protein GI | 222106351 |
COG category | [R] General function prediction only |
COG ID | [COG4603] ABC-type uncharacterized transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGGTTTG AGCGACGCGA ACATCGACCT CTTGTGCTTG TCATCGCCAC GCCCATCATG GCCATTGTCG CCGCGCTGGC GATCTCAGGC ATTCTCATTG CCATTGCGGG TGCGCCAGTT CTGGAAGCCT ATTGGCGTAT CCTGATCGGC GCTTTCGGCT CGCGGCTCTC GACCACAGAA ACACTGACCC GCGCAACACC TCTAATGCTG ACAGGTCTTT CTGCGGCAGT GGCGTTTCGG GCGCGGCTGT GGAACATCGG GGCCGAGGGC CAGCTTTATC TCGGTGCCAT CACCGTTGCG GCGGCAAGTT CGCATCTTTT GAGCGATTTT CCCCCAGTCA TCCAAATTCC CGCCCTGCTG ATCCTCGGTG CGCTCGCGGG CATGGTTTTG CTGCTCGTAC CGCTTTGGCT GCGCCTGCGT TTTTCCGTGG ACGAGGTGGT GACGACCTTG CTGCTCAATT TCGTTGCCGT GCTGTTTGTC TCAATGCTGA TTGATACCGG GTTGAAAGAT CCGATGGCTT TCGGTTGGCC GCAGTCGCAA TCGGTGGCTG ATGCTGCCAT GCTGCCAAAG CTGTTGGCGC GTTCACGCCT GCATTTGGGC CTCGTTATTG CTGTGGTGCT GGCGCTTGTG CTGCATTTTG TTCAACAGCG CACGGTGTTT GGTATTCGCT CACGTGCGGC TGGCCTCAAT CCGGCAGGTG CCGTTTTTGC AGGCGTCCCG CTTGGCCGCA CGCTGGTCAT GGTTGCTTGC ATTTCCGGTG GTCTTGCGGG GCTTGCAGGG GCTGTGGAAG TCATGGGCGT TAAGGGCTAT GTGACGACGG ATCTCTCTCC CGGCTATGGC TATTCCGGCA TAGTGGTGGC CATGCTGGCC AATCTTAATC CGCTGGGCGT TGTGCTGGCG GCGCTGTTTA CCGCCACCAT GTTCGTCGGT GCCGACAGCA TGAGCCGCGC CATGGGCATT CCCAGCTATA TTGCCGATGT GACGGTAGCT CTATCGCTGC TGACCATGTT GATCGCGCTG TTTTTCACCC AATACAGGAT TGTCCGATGA
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Protein sequence | MRFERREHRP LVLVIATPIM AIVAALAISG ILIAIAGAPV LEAYWRILIG AFGSRLSTTE TLTRATPLML TGLSAAVAFR ARLWNIGAEG QLYLGAITVA AASSHLLSDF PPVIQIPALL ILGALAGMVL LLVPLWLRLR FSVDEVVTTL LLNFVAVLFV SMLIDTGLKD PMAFGWPQSQ SVADAAMLPK LLARSRLHLG LVIAVVLALV LHFVQQRTVF GIRSRAAGLN PAGAVFAGVP LGRTLVMVAC ISGGLAGLAG AVEVMGVKGY VTTDLSPGYG YSGIVVAMLA NLNPLGVVLA ALFTATMFVG ADSMSRAMGI PSYIADVTVA LSLLTMLIAL FFTQYRIVR
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