| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5235 |
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| Symbol | |
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| ID | 7381362 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 235257 |
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| End bp | 236084 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643648874 |
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| Product | oxidoreductase protein |
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| Protein accession | YP_002547111 |
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| Protein GI | 222106320 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGTCAT CAGGCAGGAG ATCAATCATG CATTTTTCAG GAAAAATTAT TTTGATTGTC
GGCGCTTCTT CCGGCATGGG GCGAGTGCTT GCCCAGCGGC TTGCAGGCGA GGGTGCCAAG
GTGATCGTTA CGGCGCGGCG CGAGCCGATG CTCATCGAAG TGTCCGAGGA TATCAGCAGC
GCAGGTGGCG ATTGCCTCGC CATCGCGGCT GATGCAACTG ATGCGGCGGC CGCCGCCGAG
GTGGTGAAAA CCGTGATCGA TCACTATGGC CGGATCGACA TGATCTATCT GAATGCAGGC
GGTGCGCCAG CCCTGGATAT GCGGCTGATG AGCGCCAGTG ACGTCAATGC CTGCATGCGT
TTGAATTACG ATGTCGTGGT CAATTATCTC TTCCCGGTTT TGAAGCAGAT GATGCGACAG
GGTGGGGGGT ATGTTGCGCA TACGAATTCG CTCGCAGGCT TCCTCGGCGT GCCGCTTCAA
GGCCCTTATT CCGCAGCCAA GGGAGCGGCT ATGCTGCTCA TCGACACCTG CCGCGTCGAA
TTTGCCCGCT ATGGCATCAA GTTCACCACC GTTTATCCGG GGTTTGTCGC CACCGAGGCA
ACGGCTGGTG ATGGGATGCC TGCGCCTCTT GAGATTTCAG CGGACAAGGC CGTTGACCAC
ATTCTGTATG CGCTCAGGAA TGAGAAGGCG GATTATCTAT TCCCTTTCAC GATGCGCTGG
TTAATCCGGC TGGCCCATAT TCTGCCCAAG CCTCTAACGC TCTGGATTTT GGGCAAGTCG
ATGCCGGTAT TGCCGGAGAT TGGCCACACG CAAACGATAT CGACCTGA
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| Protein sequence | MQSSGRRSIM HFSGKIILIV GASSGMGRVL AQRLAGEGAK VIVTARREPM LIEVSEDISS
AGGDCLAIAA DATDAAAAAE VVKTVIDHYG RIDMIYLNAG GAPALDMRLM SASDVNACMR
LNYDVVVNYL FPVLKQMMRQ GGGYVAHTNS LAGFLGVPLQ GPYSAAKGAA MLLIDTCRVE
FARYGIKFTT VYPGFVATEA TAGDGMPAPL EISADKAVDH ILYALRNEKA DYLFPFTMRW
LIRLAHILPK PLTLWILGKS MPVLPEIGHT QTIST
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