| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5218 |
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| Symbol | |
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| ID | 7381347 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | - |
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| Start bp | 216095 |
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| End bp | 217585 |
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| Gene Length | 1491 bp |
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| Protein Length | 496 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643648859 |
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| Product | Permeases of the major facilitator superfamily |
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| Protein accession | YP_002547096 |
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| Protein GI | 222106305 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTCAAA CGGATCTATC TATGGCGAAG GGGATTCCCA CTACGCCCTA TTCAAGTGGA
ACAATGCCGG CGCGCGATGG CGCTCCGCCG AAAGTCAGCT GGAAACAGTA TATCGCCGAC
TTCGTAAAGG CCCCCAGCCG GGCCAAGGCC GCACTTGCCG GCAGTCTTCT TCTTGTGGCC
ATGGGGCCGG CTGGCCTCTC GGCACTCACT CCGTTCGTGG TGCCCGCCTT CGCGATGAAA
ACCGGGACAC CGCTGCCGGA AGCTATGCTG ATGTTTGTCG CTTTGCCGCT GATTATCGGT
CCGCTCGTCC TGCCTTTCGC CGGACAATGG GTCGATCGGT TGGGTGCCCG ACGCGTCGCT
CTTCCCGGGA TCATCCTCTA TGCACTTGTC ACGGCGATCA TACCACTTGC TGCCGGCAAG
CTCTGGCTGA TGGGAATACT TCTCGTTCTC GCGTCGATTT TTGGATTCGG GTCCAGTTTG
GGTATAGCGT TCAAGGTGAT TTCCGAGTGG TTCCCCAAGC ATCGGGGCGT CGGTTTCGGT
CTTATCGGGG TCGCATCCAG TCTGTTCAGC GCAATTTTTT CTCCCCTGTT CCAATGGCTC
GTAAACGGCA ATGCGCCGGT GTCACTACCA ATGATGCCGG GCATGAGTAC TGAAGCCCCA
TCCAAATCCG CCGCGGTGGT TGCGGCCATC GACCCCGGAA TATATGCCGG GCTTGGCTGG
AATGGCGCCT ATTACGTGAT CGCAATCGCG ATCGCCGTCA TCGGGATCCC CGCTGCCTTT
TGGCTTATCT CCGAACCGAA GGTGAGTACG ACTGCGGAAG TGCCGAAGAC CGTGGATGTC
AATCTGCCCG GCGTCCCGTT CAAGGAGGCA ATTCCGACGC GCGCCTGGAT CTCGATCACG
TTGTTCATCG CATTCGCCGC CGCCGGGCCG ATTGCCATGC GCCAGAACGC AGTGGACTTC
TATGGCCAGA CCGGCATCGA TCCGGCGACC GTGTCTCTCG CGCTGTCCTT ATGCTTCAGT
ACATCGGTTA TCGGTTTGCT CGCCGCCGGA GCAGTTCTGG ATCGGGCAAA CCATCCATGG
GTGGTCGCGG TTCTCCTGGC GACAGTGCCG ATCGGTCTGG CACTTGCCCT TGTCAACAGC
GGCAATCCTG CGCTTCTCTA CCTTTCCATG GCGCTTCTCG GTTTCGCAAC CGGCGCAGAA
TCCACTCTCG GTCCGACATT GATCGCCAGG TATTTCGGAC TGAAGTCCTT CGCCGCCTTG
CAAGGTCTCA GCCTCGCAAT CACCTCCCCG GCCCTGGCAC TGGCCCCATT CCTCGTCAGT
GTGGTCAAGA CAAGTTCGGG CAGCTACGTC GGTCCACTGC TGATGCTAAC TGCAATCGCC
CTGGTCGCGG TCATTCTCGC CGCCATGCTG CCGAGATACC CGAAACCATG GGTGCTCCAT
CAACCCTCAG GTGACGCCCT GCCCGATCGG GCGACAACGA CGACCTCATA A
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| Protein sequence | MSQTDLSMAK GIPTTPYSSG TMPARDGAPP KVSWKQYIAD FVKAPSRAKA ALAGSLLLVA
MGPAGLSALT PFVVPAFAMK TGTPLPEAML MFVALPLIIG PLVLPFAGQW VDRLGARRVA
LPGIILYALV TAIIPLAAGK LWLMGILLVL ASIFGFGSSL GIAFKVISEW FPKHRGVGFG
LIGVASSLFS AIFSPLFQWL VNGNAPVSLP MMPGMSTEAP SKSAAVVAAI DPGIYAGLGW
NGAYYVIAIA IAVIGIPAAF WLISEPKVST TAEVPKTVDV NLPGVPFKEA IPTRAWISIT
LFIAFAAAGP IAMRQNAVDF YGQTGIDPAT VSLALSLCFS TSVIGLLAAG AVLDRANHPW
VVAVLLATVP IGLALALVNS GNPALLYLSM ALLGFATGAE STLGPTLIAR YFGLKSFAAL
QGLSLAITSP ALALAPFLVS VVKTSSGSYV GPLLMLTAIA LVAVILAAML PRYPKPWVLH
QPSGDALPDR ATTTTS
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