Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_5188 |
Symbol | |
ID | 7381324 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011988 |
Strand | + |
Start bp | 185225 |
End bp | 185887 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 643648837 |
Product | two component response regulator |
Protein accession | YP_002547074 |
Protein GI | 222106283 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTGACG AATTCATTAT TATCGCTGAT GATCACCCGA TATTCCGGGA GGGCATTTTC GCTTTGGTTC GGCAGCTTTT GCCGCATTCA AAAATTGCGT CCACCGATAC TCTCGACGCC GCTCTTGAAA TTGCAAGAGC CAATCCTTTC CCGCCCAGCA TGTTCATCCT GGACCTGTTT TTTGAGGGAA ACAACATCGT ATCGAATTTG CGCGCGCTTC GCGAAGAATT TCGCCTGGCG TCGATTGTCG TGGTCACCAT GGCCAGCGAC AAAGCTTTGG TCGATACCGT CATGAATGCC GGGATCAACG GGTTCATCAA TAAAGCAGCC CTGCCGGATG AGATAAAGGA AATCCTGCGG GCGGTTCGCG AAGGTGACGT CGTTGTTCAG GTGCCGGTAT CGACGAATGC CATTGCCAGT TATGCCAGCC CGGCGCTAAG CCAACGCCAG CTCGACGTTT TGCATCTCCT TGCCGAGGGC CGGACCAATA AGGAGATCGC TATCATTCTT GGTATTTCCC CGTTCACGGT TCGCATCCAT GTCTCTGCTA TTTTCCGTGC ACTTGGCGTG GCGACCCGCG CCGGTGCCGT AACCAAGGGG ATTGCCATGG GATTGGTGCC GACCTCTCCT GGCTCATCGG AGCGGAGCTC CAATTCCAGG TAG
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Protein sequence | MTDEFIIIAD DHPIFREGIF ALVRQLLPHS KIASTDTLDA ALEIARANPF PPSMFILDLF FEGNNIVSNL RALREEFRLA SIVVVTMASD KALVDTVMNA GINGFINKAA LPDEIKEILR AVREGDVVVQ VPVSTNAIAS YASPALSQRQ LDVLHLLAEG RTNKEIAIIL GISPFTVRIH VSAIFRALGV ATRAGAVTKG IAMGLVPTSP GSSERSSNSR
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