| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5160 |
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| Symbol | rbsC |
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| ID | 7380960 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | - |
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| Start bp | 154101 |
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| End bp | 155147 |
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| Gene Length | 1047 bp |
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| Protein Length | 348 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643648813 |
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| Product | ABC transporter membrane spanning protein (ribose) |
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| Protein accession | YP_002547050 |
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| Protein GI | 222106259 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGACGG TGAATGACAT TCCCAAAGAG ACGCTGGCCC AAGCGCAGGA CCGCCAAAGT
TTGGCAAGCC TTGTGCGGGA AACCATCCGG CGCGGTGCGG TGTTCATTTT GCTGGCGGGG
TTGATTGTGA TCTTCAGCCT TGCCCAGCCC GCCTTTATCA ACATCAACAA CTTGATGAGC
ATTTTGCAAG CGGTTGCCGT GGTGGCCATC ATTGGGGCAG GCGTGACGGT GACGCTGGCA
ATTGGCGGTT TTGATCTCTC GGTGGGCGCG GTGGCAGCCT CCAGCGTGAT GGCATCCAGC
TATGCCATGA TTGTGCTGGG CTTGAATGCC TATCAAACCG TACCGCTGGT GCTGGCCTTT
GGCGCGTTGA TTGGCTTTGC CAATGCCTTT TTGATCGTCA AGCTCAAAGT GCCAGACCTT
CTTGCCACGT TGGCGATGAT GTTTCTTCTG TCCGGTCTGC AATTGATCCC AACCGCAGGG
CGTTCCATTT CGGTCGGTCT CATTCTGCCC AATGGAACAA CGGCAACGGG CAAATATGAT
CCGCTGTTTT TGACCATCGG TCGTTCCAGC CTGTTTGGCC TTATCCCCTT CCCAGTCATT
CTGCTGGCCA TTGTGGCGGT GACGCTGTTT GTTTTGACAG AGCGCACCCG TCTTGGTCGG
CTCCTGTTTG CCACCGGCGG CAATGAAGTG GCAACCCGGC TGGCGGGGGC TAATACCGCC
AAGATCAAGA CATTCGCCTA TGTCCTCTCC GGCACGCTGG CGGCCTTTGG CGGGATTATC
GTGGCGGCGC GCGTTGGCCG GGGCGATGTC TCTTCGGGGG CATCGCTGCT GATGGACTCG
GTTGCAGCCT CACTCATCGG CTTTGCCGTG CTGGGCCTGC GCCGTCCCAA CGTGCTGGGC
ACCATCATTG GTGCGGTGTT TGTTGGCATT TTGCTCAATG GCCTGACCAT GCTCAACGCC
CCCTATTACA CCCAGGATTT CGTCAAGGGT TTCGTGCTGG TTGGCGCCCT TGCCCTCACC
TATGGCGTCA GCCGCGCCCG CACATAA
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| Protein sequence | MTTVNDIPKE TLAQAQDRQS LASLVRETIR RGAVFILLAG LIVIFSLAQP AFININNLMS
ILQAVAVVAI IGAGVTVTLA IGGFDLSVGA VAASSVMASS YAMIVLGLNA YQTVPLVLAF
GALIGFANAF LIVKLKVPDL LATLAMMFLL SGLQLIPTAG RSISVGLILP NGTTATGKYD
PLFLTIGRSS LFGLIPFPVI LLAIVAVTLF VLTERTRLGR LLFATGGNEV ATRLAGANTA
KIKTFAYVLS GTLAAFGGII VAARVGRGDV SSGASLLMDS VAASLIGFAV LGLRRPNVLG
TIIGAVFVGI LLNGLTMLNA PYYTQDFVKG FVLVGALALT YGVSRART
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