| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5068 |
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| Symbol | uspA |
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| ID | 7381224 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 61378 |
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| End bp | 62232 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643648738 |
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| Product | Universal stress protein |
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| Protein accession | YP_002546975 |
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| Protein GI | 222106184 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCAAGA TCATAGGACT GATAGACGGT TCGATATATG CCCAGAGCGT CTGCGATCAT
ATCGCATGGA TTGCCGGCCG ATCCGAGGTG TCCGTGGACA TTCTGCATGT GATTGGCCGT
CGCGACCTTT CCACGGAGCC GGTCAATCTC AGCGGTAATA TCGGCTTGGG CGCCCGAACG
GCGCTTCTGG CGGAACTGGC GGAACTGGAC GCGCAAAAAG CAAGAACGGC TCAACACCGT
GGACGGCTTT TGCTGGAAGA GGCAAAGGCG CGTCTTCAAG CCGTGGGCAT CAATAGCGTC
AACACTATGC TGCGCAATGG CGATCTGGCT GAAACCCTGC AAGAGTTGGA GGAAAGCGCC
GACCTGATCG TGATCGGCAA GCGTGGTGAA GGCGCCGATT TTGCGCAATT GCACCTTGGC
TCAAACCTCG AACGGGTGGT TCGCTCCAGT CACAAGATGA TCGCCATCGC ATCACGTGCC
TTCAAGCCGA TCCGTAAAGT GCTGATCGCC TATGATGGCG GCGCGACGGC GATGAAAGCG
GTTGACTATA TATCAGGGAA TCCGATGTTT GCCGGGCTCT CTATCAAACT GGTAACGGTG
GGGGACGATA CGCCGGAAGC CCGTCAAGCC CTTGTTGAAG GTAAGCGTAG GTTTACGGAT
GCGGATGTGC CGGTTGAGAC CGCCATTGTT GCAGGGCAAC CGGATAAGGC GATTTCTGAC
ATTGTCGAGC GTGAGGAATG CGACCTGCTC ATAATGGGCG CCTATAGCCA TTCCAGGCTG
CGCGCACTTT TCCTAGGGTC AACGACAACG GAAATGATCC GGGCCTGCAA AGTGCCTGTG
TTGATTTTCC GCTGA
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| Protein sequence | MIKIIGLIDG SIYAQSVCDH IAWIAGRSEV SVDILHVIGR RDLSTEPVNL SGNIGLGART
ALLAELAELD AQKARTAQHR GRLLLEEAKA RLQAVGINSV NTMLRNGDLA ETLQELEESA
DLIVIGKRGE GADFAQLHLG SNLERVVRSS HKMIAIASRA FKPIRKVLIA YDGGATAMKA
VDYISGNPMF AGLSIKLVTV GDDTPEARQA LVEGKRRFTD ADVPVETAIV AGQPDKAISD
IVEREECDLL IMGAYSHSRL RALFLGSTTT EMIRACKVPV LIFR
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