| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_4328 |
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| Symbol | |
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| ID | 7386566 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 3642386 |
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| End bp | 3643174 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643652982 |
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| Product | short chain dehydrogenase protein |
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| Protein accession | YP_002551153 |
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| Protein GI | 222150196 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAACAGCC GCAACCCGCC GCGCCATGTG ATCATTACCG GCGGATCGAG CGGGATCGGG
CTGGCCTTGG CGAAAGCCTA TCTGTTGGCG GGGTCAAAGG TCAGTCTTGT TGCTCGCTCG
CTTGTGCGTC TTGAGACGGC TCGCAGCCAG CTGCCGGAAG CCTGTTTTTC ACATATTGGA
CTTCATGCTG CGGATGTAAC GGATTATCAG ACTCTGTCTG CTGCCTTATT GGCTGCTGAG
GATAGTTTCG GACCCTGCGA TCTGCTGATC ACCTGTGCCG GTATCGTTCA TCCGGCCAGC
ATGGAAGCCA TGGATGTTGC CGATGCGCGC CAGCAACTCG ACATCAATGT CATGGGGACG
ATCCATGCCG TTAAAGCCTT GTGGGCGGGG ATGAGCGTAC GGGGCGGCAC CATGCTGTTG
GTTTCCTCCG GGGCCGCATT CATTGGTCTG CATGGCTATG GTCCCTATTG CGCCTCCAAG
GCGGCGCTAG TGGGGCTCGC CGATTCACTG CGCATGGAAG CGGTTGGTAC CAAGCTGAGG
GTGGCGATCT GTTTTCCACC CGATACCGAT ACGCCGCAAC TGGCCGCAGA ATTGCCCATG
CGCTCGCCCC AGGCACAGCG CGTTATGGGG ACCGTTAAGC CCTGGAATGC CGACGCTGTG
GCGGCACGCA TCGTTCGCCA GCTGCAAAAA GGCCGCCGTG AGATTGTCTT CGGCATGACG
CTCCTGTTGC TCGCTCGCTT CGGGTCTCTG GTGCGTCCGG TTTTATATTG GTGGTATAGC
CGCCGTTGA
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| Protein sequence | MNSRNPPRHV IITGGSSGIG LALAKAYLLA GSKVSLVARS LVRLETARSQ LPEACFSHIG
LHAADVTDYQ TLSAALLAAE DSFGPCDLLI TCAGIVHPAS MEAMDVADAR QQLDINVMGT
IHAVKALWAG MSVRGGTMLL VSSGAAFIGL HGYGPYCASK AALVGLADSL RMEAVGTKLR
VAICFPPDTD TPQLAAELPM RSPQAQRVMG TVKPWNADAV AARIVRQLQK GRREIVFGMT
LLLLARFGSL VRPVLYWWYS RR
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