| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_4217 |
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| Symbol | |
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| ID | 7386977 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 3547701 |
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| End bp | 3548498 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643652895 |
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| Product | ABC type amino acid transport system periplasmic component protein |
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| Protein accession | YP_002551068 |
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| Protein GI | 222150111 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTTTGC GCCGCGCCAT CCTTGCCGGT CTTTCCGCAC TTTTTCTTGC TCCCTTCGCC
GCTACTGCCG CCGATCTGCC GGATCTGGGC GGCAAGACCG TTGTCGTCGT CACGGAAAAT
GCCTATCCGC CGCTGCAATT TGTCGATCCG AAGAGCGGCA AGGCGATAGG TTGGGAATAT
GACGCCATGA ACGAGATCGC CAAGCGGCTG AATGTCAAGG TCGAGTATCA GAATACCTCC
TGGGATGCTA TGATCCAGGC AGTGTCCGAC GGCCAGTATA ATATCGGCAT GACCGGCATC
ACCATCAAGG AAGATCGCAA GGAAAAGGTC GATTTCTCCG ATCCCTATAT GCGCTCGCAA
CAATTGATGC TGGTGCGCAG CGATGAGGCC CGTTTTACCG ATGCCAAGAG CTTCAAGGCC
TTCGAAAAGG GCCTGATCGC CGCGCAGCCA GGCACAAGCC CGTTCTACAC CGCCGTCTAT
GAAGTGCTTG ACGGCAACGA ACAGAACCCA CGTATCAAAC TGTTCGAAAC CTTCGGCGCG
ACCGTACAGG CCCTAAAAAC CGGCGATGTC GATCTGGTTC TGACCGACAG CACCGCTGGC
AAAGGCTATG TCGATGCCTC CGGTGGCGCC TTGAAAATCA TCGGCGAACC GCTGGGTACG
GAAGATTTCG GCTTCATCTT TCCAAAGGGT TCGGATCTGG TCAAGCCGGT CAATGCCGCC
ATCGCCGCCC TGAAGGCCGA TGGCACGTTC GACGCCTTGA ACAAGAAATG GTTCCTCGAT
TACAAGCTGG GTGATTGA
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| Protein sequence | MSLRRAILAG LSALFLAPFA ATAADLPDLG GKTVVVVTEN AYPPLQFVDP KSGKAIGWEY
DAMNEIAKRL NVKVEYQNTS WDAMIQAVSD GQYNIGMTGI TIKEDRKEKV DFSDPYMRSQ
QLMLVRSDEA RFTDAKSFKA FEKGLIAAQP GTSPFYTAVY EVLDGNEQNP RIKLFETFGA
TVQALKTGDV DLVLTDSTAG KGYVDASGGA LKIIGEPLGT EDFGFIFPKG SDLVKPVNAA
IAALKADGTF DALNKKWFLD YKLGD
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