Gene Avi_4184 details

Gene Information

• Locus tag: Avi_4184
• ID: 7386950
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Agrobacterium vitis S4
• Kingdom: Bacteria
• Replicon accession: NC_011989
• Strand: +
• Start bp: 3523318
• End bp: 3523947
• Gene Length: 630 bp
• Protein Length: 209 aa
• Translation table: 11
• GC content: 58%
• IMG OID: 643652868
• Product: acetyltransferase
• Protein accession: YP_002551041
• Protein GI: 222150084
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG1247] Sortase and related acyltransferases

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.337543
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGCCGTC TTGCCGTAAG CGTCTGGCTA TGCAAGACGA AATCTACACT GTTTCTCAGC 
GTAGAAAGTC CTATGCCCGT GCAAATCCGC GCAGCCACTC CAGCCGACAT CCCCCACATC 
ACCGAGATTT ATAGGCATGC CATTCTAACC GGAAAGGCCA GCTATGAAAT CACGCCACCC 
GACGAAGCCG AGATGGCGCA CCGGATGGAA ACGATCACCT CTCAGTTCTA TCCCTATATC 
GTCGCTGAGG ATGATGATGG CAGTCTGCTC GGCTATGCCT ATGCCTCGGC CTTTCGCACT 
CGGCCCGCCT ATCGCTGGCT GGTGGAGGAT TCGATTTATC TGGCAGAGGC AGCCCAAGGC 
AAGGGGATCG GCAAGGCGCT GCTGACCGAT CTGGTGGCGC AATGCACAGC ACTGGGTTTC 
CGGCAGATGA TCGCGGTAAT CGGCGGCGCT AATCCCGCAT CAATCGGCGT CCATCGCAGC 
CTAGGCTTTA CCCATGCGGG TGGTATCAAC GGCTCCGGCT TCAAGCACGG AACCTGGCTC 
GACACCGTTT TCATGCAGCG CGCGCTCGGC GAGGGCAACC AAACCCTGCC CGACGAAAAA 
TCCTATCCTG GAAGCCTGTT CAAAGCATAA 

 

Protein sequence

MRRLAVSVWL CKTKSTLFLS VESPMPVQIR AATPADIPHI TEIYRHAILT GKASYEITPP 
DEAEMAHRME TITSQFYPYI VAEDDDGSLL GYAYASAFRT RPAYRWLVED SIYLAEAAQG 
KGIGKALLTD LVAQCTALGF RQMIAVIGGA NPASIGVHRS LGFTHAGGIN GSGFKHGTWL 
DTVFMQRALG EGNQTLPDEK SYPGSLFKA