| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_4101 |
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| Symbol | |
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| ID | 7388897 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 3456137 |
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| End bp | 3457072 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643652805 |
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| Product | transcriptional regulator LysR family |
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| Protein accession | YP_002550978 |
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| Protein GI | 222150021 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0491587 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCGACA AGCTGGAATT TTTCATCGCT CTTGCCCGCG CCCAGCATTT CGGTCGTGCT
GCGGAAGAAT GCGGCATTTC CCAGCCCACG CTGTCAGCGG CAATCCGCCA GCTTGAAGAT
CAGCTGGGTG TGATCCTGGT GCAACGCGGT TCCCGGTTTC AAGGCCTGAC GCCCGAGGGG
CAGCGGGTGC TGGAATGGGC GCGGCGGATT GTCGGCGATG CGCGCACCAT GCGCGAGGAA
ATGCGGGCGG CGCGCAATGG TCTGGCTGGA CATATTCGCC TTGCGGTGAT CCCGACGGCG
CTGGCCATGG TGCAGAGGCT GACGGAACCA TTTCAGGCGC ATCATCCGGC TGTGACGTTC
CAGGTGGTGT CGCGCAATTC TCTCCAGGTC CTCAGTCTTC TGGAAAATCT CGAGATTGAT
GCAGGTATCA CCTATCTCGA CAATGAACCG CTTGGCCGGG TGACGTCTGT CCCGCTCTAT
GCCGAGCGTT ATCACCTGAT TGCGGCGACC GGCACGCCGC TGGCCGACCG GGAAAGTGTG
ACCTGGCGAG AGGTTTCTGA TCTTCGGCTT TGCCTATTGA CGGCCGATAT GCAGAACCGG
CGCATCATTA ATCAGCATTT CACCGAGGCG GGAGTGGTGC CTCGACCGAC ACTGGAATCC
AACTCGATGA TCGTGTTGTT TTCTCATATC CGAACCGGAC AATGGTCATC GATCATGCCG
CGTAACGTTG CGGAATCCTT CGGTTTTCCG GAGGAAATTC GCATGGTGCC GATTGTCGAG
CCGCAGGCCC AGCATCTTGT CGGGCTGGTT GCCACCCATC GCGAACCCTA TACGCCATTG
GTTTCAGCGC TATTGCATGA GGCGCGCCGC CTCGCAGCTG CACAAGTCTT TGATAGGTTT
TTTCTATCGC GTAACAATAC TGCGGTATTG ACCTGA
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| Protein sequence | MIDKLEFFIA LARAQHFGRA AEECGISQPT LSAAIRQLED QLGVILVQRG SRFQGLTPEG
QRVLEWARRI VGDARTMREE MRAARNGLAG HIRLAVIPTA LAMVQRLTEP FQAHHPAVTF
QVVSRNSLQV LSLLENLEID AGITYLDNEP LGRVTSVPLY AERYHLIAAT GTPLADRESV
TWREVSDLRL CLLTADMQNR RIINQHFTEA GVVPRPTLES NSMIVLFSHI RTGQWSSIMP
RNVAESFGFP EEIRMVPIVE PQAQHLVGLV ATHREPYTPL VSALLHEARR LAAAQVFDRF
FLSRNNTAVL T
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