| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_4065 |
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| Symbol | agrR |
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| ID | 7388870 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 3420496 |
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| End bp | 3421251 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643652778 |
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| Product | transcriptional regulator LuxR family |
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| Protein accession | YP_002550951 |
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| Protein GI | 222149994 |
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| COG category | [K] Transcription |
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| COG ID | [COG2771] DNA-binding HTH domain-containing proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCGTTTA ATGCAGACAT GTCGAGCGGC AGGACAGGAT CGGCGGCAGA TCTGAAAGCC
CGGCTGGCTG CGAACCGGGG CGATATTTTT CCTCGGCTGA TTGCCATGCA GAAGGCGATC
AACGCCCGCA GCTTCGCGGT GTTTCGGGTG GCGGGTTCAG GCCTGCCGCG CAAACGCATG
TTGCAATGCG AATGTGAGAG CTGGGCGGCT AGCGGCATGG TCGGCAGCTA TAGCGACGCA
TTTGTGTCCT GCTACGGCGA CCTTCTGCTG AGCCATATCG ACGATTTGCT GCTGCCTTTG
ATGTGGAATG CCAAGGACAA CGCCACATTC TGTATTAGCA GTGAGTTTGG GGCTTTCGTA
TCGCGCCTGC CTGCTGGCAA TCTGCCGTTT TCGGGTGTTG CCTTTCCTGT CCGGCTGGGC
GCTGTCGGCA ATGGCTATGT CATCTTCGCA TTAAACGGAT CTGAGGATCT CGATAGCGAT
GTGATGATCG ACATGCATAA TCGCAGCTGC AAGCTGATGA TGGATATTCT ATCCCTGAGC
GAGCGAAAAG TAGCGCCCTC CGAGGCGTTG AGCGACCGGG AAATCGCCTG CCTGCAATTG
GCGGGCGACG GGCGGATCAG CGAAGAAATT GCCGAAAATC TCGGCCTCTC GGTCCATACC
GTCAATGCTT ACCTGGGCTC GGCGACGATC AAGCTTGATT CGGTCAACCG TATACAGGCA
ATCGCCAAGG CTATCAGGCT CGGCTATATC AACTGA
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| Protein sequence | MAFNADMSSG RTGSAADLKA RLAANRGDIF PRLIAMQKAI NARSFAVFRV AGSGLPRKRM
LQCECESWAA SGMVGSYSDA FVSCYGDLLL SHIDDLLLPL MWNAKDNATF CISSEFGAFV
SRLPAGNLPF SGVAFPVRLG AVGNGYVIFA LNGSEDLDSD VMIDMHNRSC KLMMDILSLS
ERKVAPSEAL SDREIACLQL AGDGRISEEI AENLGLSVHT VNAYLGSATI KLDSVNRIQA
IAKAIRLGYI N
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