| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_4051 |
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| Symbol | aroB |
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| ID | 7388859 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 3408814 |
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| End bp | 3409959 |
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| Gene Length | 1146 bp |
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| Protein Length | 381 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643652766 |
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| Product | 3-dehydroquinate synthase |
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| Protein accession | YP_002550940 |
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| Protein GI | 222149983 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0337] 3-dehydroquinate synthetase |
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| TIGRFAM ID | [TIGR01357] 3-dehydroquinate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCACAG ATCAGGCATC CGAACGCCCC GAATCCTCAG AGCGCCTCGT CCATGTGCCG
CTTGGTGAGC GCGCCTATGA TATCCTGATC GGCGACGGCC TGATCGGACG GGCGGGCGGC
GAGATTTCCA CCCGTATCAA GGGCCGCAAG GCAGCCATCA TCACCGATGA GAATGTCGGG
GCGCTTTACC ACGGCGCGCT GATGGACAGC CTGGAGGCGG ACGGCTTTGA AGCCGTGTCG
CTGACCCTGC CCGCCGGTGA AAAGACCAAG AGCTTTGAGC ACCTGACCAA GGTTTGCGAC
GTGCTGCTGG AAGCCCGCAT CGAGCGCAAT GATGTGGTGA TCGCGCTTGG CGGCGGCGTT
ATCGGCGATC TCACCGGCTT TGCGGCGGGT ATCGTTCGGC GCGGGGTGCG GTTCGTGCAG
ATCCCGACCT CGCTTCTGTC GCAGGTCGAT AGTTCCGTCG GTGGCAAGAC CGGTATCAAT
GCAAGGCAGG GCAAGAATCT GGTTGGCATT TTCAACCAGC CGGATCTGGT TCTGGCCGAC
ACCGCAGTGC TGAATACGTT GAGCGAAAGA GAGTTTCGCG CCGGCTATGC CGAAGTGGCG
AAATATGGCC TGATCGACAA GCCGGAGTTT TTTGATTGGC TGGAGCGCAA TTGGCGCGAG
GTGTTTGCCG GTGGAGCGGC CCGCACGCAG GCAATTGCGC TGTCCTGCCA GGCCAAGGCC
GATGTGGTCG TGGCTGATGA GCGTGAACAT GGCCGCCGAG CCCTGCTCAA TCTCGGTCAC
ACCTTCGGCC ACGCGCTGGA AGCGGCCACG GGCTATGATA GCCGCCGCCT TGTGCATGGG
GAAGGTGTTG CCATCGGTAT GGTGCTGGCC CATGATTTTT CGGCCCGGCT CAATCTGGCC
AGCCCTGATG ATGCAAAGCG GGTCGAGCAC CATTTGAAAG AGGTTGGGCT GCCCACCCGG
ATCGCTGAGA TTCCCGGCGA TATGCCGCCC GCAGAAGAGT TGATGAAGGC CATTGCCCAG
GACAAGAAGG TCAAGGGCGG TCAATTGACC TTCATTCTCA CCCGCGGTAT CGGACAGTCT
TTCGTCGCCG ACGATGTGCC GTCCTCGGAA GTGCTGAGTT TTCTACAAGA CAATCTGCCC
GGCTGA
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| Protein sequence | MSTDQASERP ESSERLVHVP LGERAYDILI GDGLIGRAGG EISTRIKGRK AAIITDENVG
ALYHGALMDS LEADGFEAVS LTLPAGEKTK SFEHLTKVCD VLLEARIERN DVVIALGGGV
IGDLTGFAAG IVRRGVRFVQ IPTSLLSQVD SSVGGKTGIN ARQGKNLVGI FNQPDLVLAD
TAVLNTLSER EFRAGYAEVA KYGLIDKPEF FDWLERNWRE VFAGGAARTQ AIALSCQAKA
DVVVADEREH GRRALLNLGH TFGHALEAAT GYDSRRLVHG EGVAIGMVLA HDFSARLNLA
SPDDAKRVEH HLKEVGLPTR IAEIPGDMPP AEELMKAIAQ DKKVKGGQLT FILTRGIGQS
FVADDVPSSE VLSFLQDNLP G
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