| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_4048 |
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| Symbol | dnaJ |
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| ID | 7388857 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 3407769 |
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| End bp | 3408440 |
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| Gene Length | 672 bp |
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| Protein Length | 223 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643652764 |
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| Product | molecular chaperone DnaJ family |
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| Protein accession | YP_002550938 |
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| Protein GI | 222149981 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.292979 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGTCAATTC TTGTTGTGAG ATGGGGAAAG CCTCATAATT TGCCAATGAA ACTCGACTCA
AAATATTTCG ACAAGATCAG AACGCGCCGC AAGAAGGATG CGGAACCGGA GCCGCCTGTC
ACCACGTGCC AGTGGGACGG CTGCGAGCGA CCGGGCGTGC ACCGGGCACC GGTGGGTCGC
AATGCCGAAG GCAAGTTTTT CCTGTTCTGC TTCGAGCATG TGAAGGAATA CAACAAGGGA
TACAATTACT TCTCCGGTCT GTCCGACAGC GAAATTGCCC GCTACCAGAA GGAGGCGATC
ACCGGCCATC GCCCGACCTG GACGGTTGGT GTCAACAAGG CGGCCAAGGG ATCACCCATT
CACTCCACCC AGCGCTCCGG CTCGGCCACG GCGCAGGCGC GGATGAGGGA CCCTTTCGGC
TTTGTCTCGC AAGGGCGCGG CAATGCGTCG CGGTTCGAGC CGCAGGCGCG AAAGTTGAAG
ACGCTGGAAG CAAAAGCCTT CGATGCCCTG GGCTTGACGG GCGCTGCCAC CGCCCAAGAT
ATCAAGAGGC GCTATAAAGA GCTTGTCAAA AAACATCATC CAGATGCAAA TGGCGGAGAC
AGAGGTTCTG AAGAGCGTTT TCGGGCTGTT ATTCAGGCCT ATCAATTGTT AAAGCAGGCA
GGTTTCTGTT AA
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| Protein sequence | MSILVVRWGK PHNLPMKLDS KYFDKIRTRR KKDAEPEPPV TTCQWDGCER PGVHRAPVGR
NAEGKFFLFC FEHVKEYNKG YNYFSGLSDS EIARYQKEAI TGHRPTWTVG VNKAAKGSPI
HSTQRSGSAT AQARMRDPFG FVSQGRGNAS RFEPQARKLK TLEAKAFDAL GLTGAATAQD
IKRRYKELVK KHHPDANGGD RGSEERFRAV IQAYQLLKQA GFC
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