Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_3998 |
Symbol | |
ID | 7387168 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | + |
Start bp | 3369474 |
End bp | 3370064 |
Gene Length | 591 bp |
Protein Length | 196 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 643652724 |
Product | hypothetical protein |
Protein accession | YP_002550898 |
Protein GI | 222149941 |
COG category | [S] Function unknown |
COG ID | [COG1238] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGCGAC GCCTTTACGA CTGGACCATG TCGCTTGCCG CCCGCAAATC TGCGGAAGCC TGGCTTGGGG CAATCTCCTT TGTGGAAAGC TCGATCTTTC TTGTCCCTGC CGATGTGCTG TTCCTGCCCA TGGCGCTGGC CAAGCCGGAA AAGGTCTGGC GCTATGCGAC CATTGCCACC ATCACCTCGG TTTTGGGCGG CATAGCTGGT TGGTTTCTCG GTTATTACGC CTATGAAAGC ATTGCCCGGC CAATCCTTGA GTTTTACGGC AAGGCCGATG CCTTCGACCA GCTGCGCCTG TCGGTGGACT ATGAAACGGT GGTGCTGCTG TTGATCACCT CCGGCCTGGC CCATCTGCCC CCCATCAAGG TCGTGACCAT CCTGTCGGGC GTCGCCCATG TGAATATCTG GTTGTTCATC ATGACCGCCA TCGTCGCGCG TGGAGGCCGG TTTTTCCTTC TGGCCTGGCT GCTGCGTCGC TACGGTGAGC CGATCCGCCA TTTCATTGAA AAACGCCTCG GCCTGATCGC CGCTATCGGC GCTATCGTGC TGATCGCCCT GTTCGTCGCC TATCGCCTCC TTGTCCATTG A
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Protein sequence | MLRRLYDWTM SLAARKSAEA WLGAISFVES SIFLVPADVL FLPMALAKPE KVWRYATIAT ITSVLGGIAG WFLGYYAYES IARPILEFYG KADAFDQLRL SVDYETVVLL LITSGLAHLP PIKVVTILSG VAHVNIWLFI MTAIVARGGR FFLLAWLLRR YGEPIRHFIE KRLGLIAAIG AIVLIALFVA YRLLVH
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