Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_3929 |
Symbol | |
ID | 7387286 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | - |
Start bp | 3296314 |
End bp | 3297312 |
Gene Length | 999 bp |
Protein Length | 332 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 643652670 |
Product | ABC transporter membrane spanning protein (oligopeptide) |
Protein accession | YP_002550851 |
Protein GI | 222149894 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCCGCT ATATTCTCTG GCGCATTGCC GTGATGATCC CGACGCTGAT CATGATTTCC ATGCTGGTCT TCACCATTAT CGAGCTGCCA CCCGGTGATT ACTTTGAAAG CTATGTCGAG GAAATGCGGG CCATTGGCGA AAAGGCCGAT TTGCAGGAAA TCGAGGATTT GAAGGCGCGC TACGGTTTCG ATCAGCCTGC GCCGATCCGC TATTTCAACT GGGTCACCGG CTTTGTGCAG GGGGATTTCG GCTATTCCTT CGAATACCGC ATGCCAGTGG CCGATGTGGT CGGCGACCGG GTCTGGCTCA CCATCCTGGT TTCCACCGTC ACCATCGCTG TCACCTGGCT GCTGGCCTTT CCAATCGGCA TCTATTCCGC CACCCATCAA TATAGCTGGG GCGATTACGG GTTGACCTTG CTGGGCCTGA TCGGCATCGC CGTGCCAAAC TTCATCCTGG CGCTTGTCAT GATGTATTTC GCCAATATCT GGTTCGGCAT TTCCATCGGC CATCTGATGG ACCAGCGCTT TCTGGGTCAG GCGATGAGCT GGGACAAGTT CAAGTCTATC CTCGAACATT TGTGGATTCC GGTCATCATC ATCGGCACGG CGGGCACCGC TGGCATGGTG CGCCGTGTCA GGGCCAATCT GCTGGACGAG CTGCACAAGC AATATGTGAT GACGGCGCGC GCCAAGGGGC TGCATCCGTT TCGGGTGCTG ATCAAATATC CGCTGCGCAT GTCGTTGAAT TTCTTCATTT CCGATATCGG CTCCATCCTG CCGACAATCA TTTCCGGGGC GGAAATCACC GCCGTCGTGC TGTCGCTGGA AACCACCGGC CCGATGCTGA TCCGGGCGCT TCAGGACCAG GACATGTATC TGGCCGGATC GTTTCTGATG TTTTTGGCGG TGCTAACGGT CATCGGCGTG TTGATTTCGG ATATCGCGCT GGCGCTGCTT GATCCGCGCA TCCGCTTGCA GGGAGGGCGC AGCAAATGA
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Protein sequence | MIRYILWRIA VMIPTLIMIS MLVFTIIELP PGDYFESYVE EMRAIGEKAD LQEIEDLKAR YGFDQPAPIR YFNWVTGFVQ GDFGYSFEYR MPVADVVGDR VWLTILVSTV TIAVTWLLAF PIGIYSATHQ YSWGDYGLTL LGLIGIAVPN FILALVMMYF ANIWFGISIG HLMDQRFLGQ AMSWDKFKSI LEHLWIPVII IGTAGTAGMV RRVRANLLDE LHKQYVMTAR AKGLHPFRVL IKYPLRMSLN FFISDIGSIL PTIISGAEIT AVVLSLETTG PMLIRALQDQ DMYLAGSFLM FLAVLTVIGV LISDIALALL DPRIRLQGGR SK
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