| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3869 |
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| Symbol | |
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| ID | 7388551 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 3221418 |
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| End bp | 3226136 |
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| Gene Length | 4719 bp |
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| Protein Length | 1572 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643652618 |
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| Product | Ca 2+ binding protein |
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| Protein accession | YP_002550799 |
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| Protein GI | 222149842 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.385063 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGACTA AACGCTTTGT TGCTGACCTG CGTCGGCAAT TACCACAATG GGGATTTACC
GTGGCAACGT CTAATAAGAC AACGACTGTA AGCAGTCTTG ATGGTTTGAC TGGAACGAGT
GCAACGGACA TTATTCTCCT GACCGATCAG GTTTCGGGCG CTTACCTTGA TCTTGGTGGT
GGCAGCGACA AGCTGATCCT TGGCAATTTC GACAATGATG TGACATTGTC CAATGTCGAA
TCCGTTTTGG GCGGCACCGG TGCGGATTCG ATTTTCTACG ATACCAAGGC TACCTCAGGT
TACATCGACT TGGGCGCCGG CATCGACAGC CTGACCTTTT CAGACCTTGG CGTCACCGCA
ACCATCCTCA ATGTGGAAAC GATCGTCGCT GGCCAGGGCA ATGACTATTT GACGATGAGC
GCCCAGGCGC TCGGGACCTA TATCGATCTC GGAACCGGTT CGGACCGGGT GATCCTCGGC
AAATTCGATA ATTCGCTCAC CCTGATCGAT GTTGAGACGG TTACCGGCAG TACCAAGTCC
GATATCGTGA TTATGGAGAA TAAAAGCGGC GACCAGACGC GCCGCGTGGA TCTCGGTTCC
GGCAACGACT CTGTTAGTCT CGGCGATGGC GGCGGCACGG TCTATGTCTC CAATACCGAA
ACAATCGTGG CTGGCAGCGG CGACGACCGC ATTCAGCTGA ACAGCAAGGC TTCCAATTTC
AGTATCGATG CCGGTGAAGG CGATGATACT GTCGTTCTCA GCAATTATAC CAATAAGCTG
ACAATCTCAG GTGCCGAAAG CATCGTCGGA TCGAGCGGAA GCGATCACGT CACGATCGGG
AGTGTGTTCA CTGGCGGATA TGTTTCTCTG AATGGCGGCA ATGATACGCT CGTTCTGGGA
AATTACACCA ATTCCGTCAG TGTCTACGGT GTCGAGACCA TTTATGGTGG CTCGGGCAGC
GATTTTATCT ACATGCAGGA GGCCAAGTCC GGCGGCTTGA TCGATCTCGG AGCCGGCGAA
GATACACTGG TCTTCAATGA GGACGGCGGC ACGGCCACCT TGAAAAATGT CGAGAATATC
ATCGGCAGTG AAACCAAAGA CTATATTATT TTCAAAACGC AGATAACCGG CGGCCTGATC
GATCTGGACG ACGATGGCGA CCGCGTAACC CTGGGCAAGT ACAACAACAA TGTCACGTTC
GCCAATGTCG AAACCATTAC CGGCGACAGT TCCAGCGACA TCATTACGCT GACCACCGAG
CTGACCAAGG GCACGATCAA TCTCAGCACT GGCATGGACA AGCTGACGCT GGCCGATGGT
TCCAACACCA TCAACATTTC CGGTGTCGAA ACCCTGATCG GCGGCGATGG TGAAGATACG
ATCAATTTCT CGGTCGCCTC GACGGGTGGC GAAATCGATC TCAAGGGCGG CGATGATACA
TTGACGCTTA CCGGCTCTGG ACGAACCTTG ACCATTTCCA ACGTCGAGAC AATTCTGGGC
AGTTCCGCCA GCGAGCAGAT TCTGTACAAG ACCCTGTTGA CCGGCAATCT GATCTCGCTC
GGCTCCGGCT CCGACAAGCT CACGATGGGT GATTTTGATA ATACCGTTTC CATCGCTGGG
ATTGAAACCA TCGTCGGCGG CACCTTGACC GATGAAGTGT ATATCACCAG CGCCATTACT
GGCTCGCTGA TCGATCTGGG TACCGGCATC GATACGGTGA CCATCATGAA AGGTGGCACG
ATCACGGCCC GCAATATCGA GAGCATCATC GGCGATGACG GCATCGACGT CGTTAAATTT
GATCGGGCCG CGGAGAAAGT CTATCTCGAC CTGGGGGCTG GCAATGACAG CGTCACCTTC
GGCAATTACA ACAATATAGC CGAACTCCGG AATGTTGAGA CCATCAATGC GGGCACGTCC
AGCGACGTGA TCACGCTCGG CACTGACATG TCGGCCGGTA CGATTGACCT CGGCAAGGGT
CTCGATCAGC TGACGCTGAG TGACGAGGGC GGCACCCTGA CGGCGGCCAA TATCGAAACG
ATCTTCGGCG GTGCGGCGGA CGACGTCGTG ACGGTTTCAG GAACCGTGAC CATTGGCACG
ATCGACCTCA AAGCGGGTGA CGATACGTTG ACCATCGGTG GTAGTGCGAC CGTGACCGTG
CAGAATGTCG AAACGCTGGT CGGCGGAGCC GGAACCCAGA AAATCATCCT TGCCAGTGGG
TTCAAGGGCA GTATCGATCT CGCTGACGGT GTCGATACCA TCATCATGGC CGATGTCGCT
GACGCCAACG CGACCGCCAT GAAGAACCTT ATCACGATTT CCAATGTCGA AACCATCACC
GGCGGTTCCG GTTCGGATAC AGTTGTGATC GGCACGGTCG GCGGCGCAAC CATGATCGAT
TTGGGTGATG GCGACGATAC CTTGAAATTC CAGGATAATG GCGGATCGTT GACGGCTGCC
AATGTGGAGA CGATCATCGG TGGAACCGGC GATGAAGTCA TCCGGTTTAA CGCGACGGTC
ACCGGCGTTG ATATCGACCT CGGCGATGGC AACGACACTG TCATCTTCGG CAATTACGCC
AATGAGGCGA CGCTGGCCAA TGTGGAAAGC ATCACCGGCG GCACCGGCAG CGACGTGTTC
ACGCTGGCCT CCGGCACGAC TGGCATGGCC CTCAATCTCG GCAACGGGCT CGACAGCCTG
ACGCTGGCGG ATGAAGGCGG AACGCTGACG GTCTCCAGCA TCGAAACGAT TGTCGGCTCG
GATGTCGACG ACATTATTTC GCTTTCCGCC TATATGACCG GTGGGGAGAT TTCGCTTGGT
GCCGGCAATG ACCAGTTCAT CATTGGCGAT GTCGGCGGCA CGGCGACGGT GAACGGCATC
GAAACGGTGA CCGGTGGTGC TGCCGCCGAT CTTATCACCC TTGCCGAAGG TGCATCGGGC
TATATCAATC TGGGGGCAGG TCAGGATGGC GTTATCCTGT CGGCAACCGG AACTACGGTG
ACCGTGGGTG GCGTTGAAAC GGTGATCGGC AATAACGTGA CCCTGTCGGG CGTCGAAACG
GTGACCGGGG GTGCGGGAAA TGATACGGTT GAGTTTTCCG ATGCGGTAAC CGCGACGACT
ATCAAGCTCG GCGGTGGCAA CGACATTCTT CAGATGTCGG AACTGGGAGG CACTCTGACC
GTCACCGGGG CCGAATCCAT TCTCGGCGAT GTCGGCAGCG ACGTCATCAC CCTTGGTGAA
CAGATTACGG ATGGCTTCAT CAATCTCAAT GCTGGCAGTG ACCGCCTCAT CCTGTCTTCC
GCCAACAATA CGTTGACGGT GGAAAATATC GAAACGGTGA CTGGCGGCTC GATGATCGAC
GACATCACTT TGTCTGGCGT CTATACCGGC GGCACTCTGG ATCTGGGCAG CGGCAATGAC
CTGCTGACGT TCGGCGAATC CGGAACCGTG ACGATCGCCA ATGTCGAAAC GGTGGTCGGG
TCAACCGGCG ACGATGTGCT GACTGTCAGC GGGTCGATCG GCGGGGCAAC TCTTAATCTG
GGGGATGGCC AGGATACCCT GAGCTGGAGC GCGGGCCTGA CGGCAACGGT TTCGAACGTT
GAGACGGTCA ATGGCGGCTC CAATGCCGAC ATCATCACGC TGGCCACGCA ATGGACCGGT
GGATTTATCG ATCTGGGCGA TGGTTCCGAC AAGCTGACGC TGGCCAACAC GACCAATACG
GTGACGGTGG CGAATGCGGA AACCATTATC GGTCAGTCCA TGGCGGACTA TATCGCCATC
AACAGCAGCA CCTATAGCGG CTATATTTCA CTGGGCGGAG ATACGGATGA ACTAAAGCTG
GCGTCCTCGA CAAGCACGGT GACAATCGTC GGCGTTGAAA CGGTCACGGG TGGTTCCGGC
GACGACAAGG TGACATTGGG TGCTCAGGTG TCGGGCATCC AACTCAACCT GGCCGACGGC
AATGACGTGG TCACGCTCGG CAATTATTCC AATGATATAA CCCTCTATAA TGTCGAATCC
GTCACCGGCG GCAGCAATAC CGATGTGGTC TATATCAAGG ACACGGAAAT CTCCAACGGC
CAGTATTTCC TGGGTACAGG CGTGGATTAC CTGAACTTTG AGAAAGCCGC GACCGCGACC
GTTTCCAGTG TCGAAACCCT GGTCGGTTCT GCCTATGACG ATACGATCAC CATTTCCGGC
CAGTATACCG GCGTGACGAT TGATCTGAGC GCGGGCTCGG ACACGTTGAC GCTCGGTTCC
GCCTCGACGC TGACCACGGC CAATATCGAG TATATCACCG GCAGCACGGG GGCCGATTTG
ATCGTGCTGT CGGGCAGCAC CAATACGACG GTGGACCTGG GGTCTGGCAA TGACACGATC
TATATGAGCA GCGGCTCCGA TACTGTGACG GGTGGGGCCG GTTCCGACCT CTTCACCTTC
ACCTCCACGG ACAAATCGAG CACGTCGAGC CCGGACAAGA TCACCGACTT CGTCAATGGT
GAAGACAAGC TGGTGTTCAA CGGTCTGCTG CAGGGCACCT TCACTTATCT GGGGGCAGAG
AAATTTTCGG TCACAGACCA TACCCAGGCC TATTTCGTCA ATGATACCGC AACACTCTAT
ATCGATTTCG ATGGCGACGC GGTGGCAGAT ATGCAGATGA CCTTGTCCGG CAAGACCGCC
GACAACATGT CGGCCAGCGA CTTCCGCTGG AACTCATAA
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| Protein sequence | MSTKRFVADL RRQLPQWGFT VATSNKTTTV SSLDGLTGTS ATDIILLTDQ VSGAYLDLGG
GSDKLILGNF DNDVTLSNVE SVLGGTGADS IFYDTKATSG YIDLGAGIDS LTFSDLGVTA
TILNVETIVA GQGNDYLTMS AQALGTYIDL GTGSDRVILG KFDNSLTLID VETVTGSTKS
DIVIMENKSG DQTRRVDLGS GNDSVSLGDG GGTVYVSNTE TIVAGSGDDR IQLNSKASNF
SIDAGEGDDT VVLSNYTNKL TISGAESIVG SSGSDHVTIG SVFTGGYVSL NGGNDTLVLG
NYTNSVSVYG VETIYGGSGS DFIYMQEAKS GGLIDLGAGE DTLVFNEDGG TATLKNVENI
IGSETKDYII FKTQITGGLI DLDDDGDRVT LGKYNNNVTF ANVETITGDS SSDIITLTTE
LTKGTINLST GMDKLTLADG SNTINISGVE TLIGGDGEDT INFSVASTGG EIDLKGGDDT
LTLTGSGRTL TISNVETILG SSASEQILYK TLLTGNLISL GSGSDKLTMG DFDNTVSIAG
IETIVGGTLT DEVYITSAIT GSLIDLGTGI DTVTIMKGGT ITARNIESII GDDGIDVVKF
DRAAEKVYLD LGAGNDSVTF GNYNNIAELR NVETINAGTS SDVITLGTDM SAGTIDLGKG
LDQLTLSDEG GTLTAANIET IFGGAADDVV TVSGTVTIGT IDLKAGDDTL TIGGSATVTV
QNVETLVGGA GTQKIILASG FKGSIDLADG VDTIIMADVA DANATAMKNL ITISNVETIT
GGSGSDTVVI GTVGGATMID LGDGDDTLKF QDNGGSLTAA NVETIIGGTG DEVIRFNATV
TGVDIDLGDG NDTVIFGNYA NEATLANVES ITGGTGSDVF TLASGTTGMA LNLGNGLDSL
TLADEGGTLT VSSIETIVGS DVDDIISLSA YMTGGEISLG AGNDQFIIGD VGGTATVNGI
ETVTGGAAAD LITLAEGASG YINLGAGQDG VILSATGTTV TVGGVETVIG NNVTLSGVET
VTGGAGNDTV EFSDAVTATT IKLGGGNDIL QMSELGGTLT VTGAESILGD VGSDVITLGE
QITDGFINLN AGSDRLILSS ANNTLTVENI ETVTGGSMID DITLSGVYTG GTLDLGSGND
LLTFGESGTV TIANVETVVG STGDDVLTVS GSIGGATLNL GDGQDTLSWS AGLTATVSNV
ETVNGGSNAD IITLATQWTG GFIDLGDGSD KLTLANTTNT VTVANAETII GQSMADYIAI
NSSTYSGYIS LGGDTDELKL ASSTSTVTIV GVETVTGGSG DDKVTLGAQV SGIQLNLADG
NDVVTLGNYS NDITLYNVES VTGGSNTDVV YIKDTEISNG QYFLGTGVDY LNFEKAATAT
VSSVETLVGS AYDDTITISG QYTGVTIDLS AGSDTLTLGS ASTLTTANIE YITGSTGADL
IVLSGSTNTT VDLGSGNDTI YMSSGSDTVT GGAGSDLFTF TSTDKSSTSS PDKITDFVNG
EDKLVFNGLL QGTFTYLGAE KFSVTDHTQA YFVNDTATLY IDFDGDAVAD MQMTLSGKTA
DNMSASDFRW NS
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