Gene Avi_3778 details

Gene Information

• Locus tag: Avi_3778
• Symbol: soxG
• ID: 7388232
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Agrobacterium vitis S4
• Kingdom: Bacteria
• Replicon accession: NC_011989
• Strand: +
• Start bp: 3145219
• End bp: 3145785
• Gene Length: 567 bp
• Protein Length: 188 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 643652548
• Product: sarcosine oxidase gamma subunit
• Protein accession: YP_002550729
• Protein GI: 222149772
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG4583] Sarcosine oxidase gamma subunit
• TIGRFAM ID: [TIGR01375] sarcosine oxidase, gamma subunit family, heterotetrameric form

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.269051
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTTGAGC CAATCATCTC CGGCGCGATG TCCGCCACCC GCAAATCGGT CCTTGACGGT 
GCCTACGGCG GCTCCGCCCA TGTGGCGCTG ACGCCAGCCG CACCGGCCTC ACGCATCTCG 
CTGCGGGCCG GAGCGGATGC TGTCTCCGGT CTTTCCTCAG CCCTTGGCCT GACCCTGCCG 
ACGGCGCCGA AAACCTCCGC CCATGCAGGT CCGCGCCTCG CCTTCTGGCT TGGCCCAGAC 
GAATGGCTTG TCATCGATGA AGACGGCGCT GACCTCATCG CCGCCTGCGC TGCCGCCGGC 
ACCATTCAAT CCGCCACCGA TGTCTCCCAC CGCAATACCG CCATCCTGGT TTCCGGCCCC 
GGCGCGGTAA AAACCCTCAA CGCCGCCTGC CCGCTTGACC TGTCACTGAA AACCTTTCCG 
CTTGGTGCTG TCACCCGCAC CGTATTCGGC AAGATCGAAA TCGTCCTCTA CCGGATGAGC 
GAGGACGCCT TTCGGGTAGA ATGCTGGCGG TCCTTTGCCG AATATGCCTT CGGCATGTTG 
CAGGAAGGGG CGGCGGACGC GGCGTGA 

 

Protein sequence

MVEPIISGAM SATRKSVLDG AYGGSAHVAL TPAAPASRIS LRAGADAVSG LSSALGLTLP 
TAPKTSAHAG PRLAFWLGPD EWLVIDEDGA DLIAACAAAG TIQSATDVSH RNTAILVSGP 
GAVKTLNAAC PLDLSLKTFP LGAVTRTVFG KIEIVLYRMS EDAFRVECWR SFAEYAFGML 
QEGAADAA