Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_3560 |
Symbol | ung |
ID | 7388824 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | - |
Start bp | 2954582 |
End bp | 2955283 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 643652392 |
Product | uracil-DNA glycosylase |
Protein accession | YP_002550575 |
Protein GI | 222149618 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0692] Uracil DNA glycosylase |
TIGRFAM ID | [TIGR00628] uracil-DNA glycosylase |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGCAAT CGACGCTTCG CTTGGAAGAC AGCTGGAAGG CCGTGGTCGG CGAGGAATTC GAAAAGCCCT ATATGCAGAC CCTCAAGCAG TTTCTGGTCG AGGAAAAGCA GCAGGGCAAG CCGATTTTCC CCAAAGGGCC GGAGTATTTC CGGGCGCTGG ATCTGACCCC CATCGACAAG GTGCGAGTGG TGATCCTGGG GCAGGACCCC TATCACGGCG CAGGACAGGC GCACGGCCTG TGCTTTTCTG TCCAGCCCGG CGTGCGCATT CCGCCGTCGC TGGTCAATAT CTACAAGGAA TTGCAGGCCG ATCTCGGTAT TGCCCCGGTG CGCCACGGTT TTCTGGAACA TTGGGCGCGC CAGGGCGTGC TGCTGCTCAA CAGCGTGTTG ACGGTGGAAG AGGGCAGGGC CGGATCGCAT CAGGGCAAGG GTTGGGAAAA GTTCACCGAC CGGGTCATCC ATGCCGTGGC CGAACGCCGC GAGCATGTAG TCTTCATCCT TTGGGGGGCT TACGCGCAGA AAAAGGCGGC TTTCGTCGAT CCGGCCCGGC ATCTGGTGCT GAAATCCGTG CATCCGTCGC CATTGTCTGC CCATAACGGC TTTTTCGGCT CAAAGCCGTT TTCCAAAGCC AACGCCTATC TGGAAGCGCA TGGAGAGGTC CCCATCGACT GGCAGCTTCC AGCCGATCCA GGACAGGGAT AG
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Protein sequence | MAQSTLRLED SWKAVVGEEF EKPYMQTLKQ FLVEEKQQGK PIFPKGPEYF RALDLTPIDK VRVVILGQDP YHGAGQAHGL CFSVQPGVRI PPSLVNIYKE LQADLGIAPV RHGFLEHWAR QGVLLLNSVL TVEEGRAGSH QGKGWEKFTD RVIHAVAERR EHVVFILWGA YAQKKAAFVD PARHLVLKSV HPSPLSAHNG FFGSKPFSKA NAYLEAHGEV PIDWQLPADP GQG
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