Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_3551 |
Symbol | |
ID | 7388815 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | + |
Start bp | 2945709 |
End bp | 2946683 |
Gene Length | 975 bp |
Protein Length | 324 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 643652383 |
Product | ABC transporter nucleotide binding/ATPase protein |
Protein accession | YP_002550566 |
Protein GI | 222149609 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.375079 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGAGGA TGCTCCTTCC TCCTCATCCT ATTTTCTTGT TTGCGTTTGT CTTGGGGAAA AGTGGAAACC GGTTTTCCCT AAGACAAACT CTAGGCCCTT CAACGACAGG CCCCGGAATG ACCCCGACTG AACCACTGCA AAAGCCGCGC ACTGAAAACC GCCAGCGCGC CCTCGTCATG CTAACAGGCG TGTCCAAAGT GTTTTCCAGC GGCACGGTGG CGCTGTCCAA CATGTCACTC ACCGTCGAGG CGGGTGAATT CGTCAGCCTG CTCGGTCCCT CCGGCTGCGG CAAATCGACA GCGCTTCGGA TCATTGCCGG TCTCGGTGGC ATCTCCAGCG GCACGGTCGA TTGGCCCAGT TCCCGCATCA ATGCCAAGGG GCTGCCGGAA GGCGATATCA GCTTTGTTTT CCAGGAGCCG ACCCTGCTGC CCTGGCAGAC CGTGTTCGGC AATGTCTATC TGCCGCTGCG TCTGCAAGGG ATTTCCAAGG CAGCAGCAAC CTCGACTGTT CTCGAAACCC TTGACAGCGT GGGCCTGAAG GATTTCGCGC AGGCCTATCC GCGCCAGCTT TCCGGCGGCA TGAAAATGCG GGTGTCGATT GCCCGGGCGC TAGCGACCAA GCCGAAATTG CTGCTGATGG ACGAGCCGTT TGCAGCCCTT GATGAAATCA CCCGGCAAAA GCTGAACGAC GACGTGCTGC GGCTGTGGCG CGAGACCGGC ATTACCGTGA TCTTCGTGAC CCATTCAGTG TTCGAGGCCG CCTATCTCTC CAATCGCATC GTGGTGATGA AGGCAAGGCC TGGCCGGGTG CATGCGGATT TCACCATTGC CACCAGCCTG GAACGCGACG CCCATTACCG CACCTCGGAA GAATACCGGC AGGTCTGCGA AAAGGCTTCG AATGTCCTGC TGGAAGCCAT CGGCTTTCCT CTTGATGGCG GCCTCTCCAT GGCGGGATTG GAGCATCACG GATGA
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Protein sequence | MMRMLLPPHP IFLFAFVLGK SGNRFSLRQT LGPSTTGPGM TPTEPLQKPR TENRQRALVM LTGVSKVFSS GTVALSNMSL TVEAGEFVSL LGPSGCGKST ALRIIAGLGG ISSGTVDWPS SRINAKGLPE GDISFVFQEP TLLPWQTVFG NVYLPLRLQG ISKAAATSTV LETLDSVGLK DFAQAYPRQL SGGMKMRVSI ARALATKPKL LLMDEPFAAL DEITRQKLND DVLRLWRETG ITVIFVTHSV FEAAYLSNRI VVMKARPGRV HADFTIATSL ERDAHYRTSE EYRQVCEKAS NVLLEAIGFP LDGGLSMAGL EHHG
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